Orthogroup:group_2673



Homologs in group_2673

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04875 FBDBKF_04875 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
EHELCC_06165 EHELCC_06165 Morganella morganii S2 emrA Multidrug resistance efflux pump EmrA
NLDBIP_06485 NLDBIP_06485 Morganella morganii S4 emrA Multidrug resistance efflux pump EmrA
LHKJJB_03365 LHKJJB_03365 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
HKOGLL_06840 HKOGLL_06840 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
F4V73_RS09475 F4V73_RS09475 Morganella psychrotolerans - HlyD family secretion protein

Distribution of group_2673 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2673 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2673

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2673.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 emrA 5
2 - 1

Product

# Product Occurence
1 Multidrug resistance efflux pump EmrA 5
2 HlyD family secretion protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1566 6 V Defense mechanisms (V) Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13408 6 membrane fusion protein Plant-pathogen interaction -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00529 5 Cation efflux system protein CusB domain 1
PF13437 1 HlyD family secretion protein
PF16576 5 Barrel-sandwich domain of CusB or HlyD membrane-fusion

Annotations of the 10 SwissProt hits

Annotation Number of occurrences
Colicin V secretion protein CvaA 1
Hemolysin secretion protein D, chromosomal 1
Hemolysin secretion protein D, plasmid 1
Leukotoxin export protein LtxD 1
Leukotoxin secretion protein D 2
Microcin H47 secretion protein MchE 1
Protein CyaD 2
Type I secretion system membrane fusion protein PrsE 1

Protein length

Min length 428
Max length 441
Mean length (sd) 430.2 (5.3)
Median length 428.0

Protein length distribution