VFG044296


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG044296, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein TonB-dependent receptor
VF ID VF1251
Category Nutritional/Metabolic factor
Protein ID WP_000428182
Vf_category_id VFC0272

Occurence in the database

VFG044296 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2645 FBDBKF_04065 207759 209195 -1 TonB-dependent receptor Morganella morganii S1
1 group_2645 EHELCC_06470 37407 39344 1 cirA Outer membrane receptor protein, Fe transport Morganella morganii S2
2 group_2645 NLDBIP_06795 37781 39217 1 TonB-dependent receptor Morganella morganii S4
3 group_2645 LHKJJB_06330 1026 2963 1 cirA Outer membrane receptor protein, Fe transport Morganella morganii S3
4 group_2645 HKOGLL_04600 230424 232361 -1 cirA Outer membrane receptor protein, Fe transport Morganella morganii S5
5 group_2645 PMI_RS12820 2830683 2832671 -1 TonB-dependent receptor Proteus mirabilis HI4320