Orthogroup:group_262


Homologs in group_262

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04725 FBDBKF_04725 Morganella morganii S1 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase
EHELCC_06015 EHELCC_06015 Morganella morganii S2 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase
NLDBIP_06335 NLDBIP_06335 Morganella morganii S4 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase
LHKJJB_03215 LHKJJB_03215 Morganella morganii S3 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase
HKOGLL_06690 HKOGLL_06690 Morganella morganii S5 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase
F4V73_RS09200 F4V73_RS09200 Morganella psychrotolerans - thiamine pyrophosphate-binding protein
PMI_RS01075 PMI_RS01075 Proteus mirabilis HI4320 - thiamine pyrophosphate-binding protein
PMI_RS04150 PMI_RS04150 Proteus mirabilis HI4320 - thiamine pyrophosphate-binding protein

Distribution of group_262 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_262 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_262

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_262.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pDC1 5
2 - 3

Product

# Product Occurence
1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase 5
2 thiamine pyrophosphate-binding protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3961 8 GHR Carbohydrate transport and metabolism (G)
Coenzyme transport and metabolism (H)
General function prediction only (R)		 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04103 7 indolepyruvate decarboxylase [EC:4.1.1.74] Tryptophan metabolism
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00205 8 Thiamine pyrophosphate enzyme, central domain
PF02775 8 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PF02776 8 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

Annotations of the 141 SwissProt hits

Annotation Number of occurrences
2-hydroxyacyl-CoA lyase 4
2-hydroxyacyl-CoA lyase 1 4
2-hydroxyacyl-CoA lyase 2 2
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 12
Acetolactate synthase 4
Acetolactate synthase (Fragment) 1
Acetolactate synthase 1, chloroplastic 4
Acetolactate synthase 2, chloroplastic 3
Acetolactate synthase 3, chloroplastic 1
Acetolactate synthase catalytic subunit, mitochondrial 2
Acetolactate synthase isozyme 1 large subunit 1
Acetolactate synthase isozyme 2 large subunit 1
Acetolactate synthase isozyme 3 large subunit 2
Acetolactate synthase large subunit 14
Acetolactate synthase large subunit IlvB1 2
Acetolactate synthase large subunit IlvG 2
Acetolactate synthase, catabolic 2
Acetolactate synthase, chloroplastic 1
Acetolactate synthase, mitochondrial 3
Alpha-keto-acid decarboxylase 10
Benzaldehyde lyase 1
Benzoylformate decarboxylase 2
Cyclohexane-1,2-dione hydrolase 1
Glyoxylate carboligase 2
Indole-3-pyruvate decarboxylase 2
N(2)-(2-carboxyethyl)arginine synthase 1
Oxalyl-CoA decarboxylase 1
Probable 2-ketoarginine decarboxylase AruI 1
Probable acetolactate synthase 1
Probable acetolactate synthase 2, chloroplastic 1
Probable acetolactate synthase large subunit 2
Probable pyruvate decarboxylase C186.09 1
Probable pyruvate decarboxylase C1F8.07c 1
Probable sulfoacetaldehyde acetyltransferase 1
Putative acetolactate synthase isozyme 2 large subunit 1
Putative acetolactate synthase large subunit IlvB2 1
Putative acetolactate synthase large subunit IlvX 1
Putative pyruvate decarboxylase C13A11.06 1
Putative pyruvate decarboxylase C3G9.11c 1
Putative thiamine pyrophosphate-containing protein YdaP 1
Pyruvate decarboxylase 12
Pyruvate decarboxylase 1 5
Pyruvate decarboxylase 1 (Fragment) 1
Pyruvate decarboxylase 2 4
Pyruvate decarboxylase 2 (Fragment) 2
Pyruvate decarboxylase 3 3
Pyruvate decarboxylase 3 (Fragment) 1
Pyruvate decarboxylase 4 1
Pyruvate decarboxylase isozyme 1 1
Pyruvate decarboxylase isozyme 2 1
Pyruvate decarboxylase isozyme 3 1
Pyruvate dehydrogenase [ubiquinone] 1
Pyruvate oxidase 2
Sulfoacetaldehyde acetyltransferase 4
Thiamine metabolism regulatory protein THI3 1
Transaminated amino acid decarboxylase 1
Uncharacterized protein MJ0663 1

Protein length

Min length 545
Max length 549
Mean length (sd) 548.5 (1.4)
Median length 549.0

Protein length distribution