COG0572


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0572, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uridine kinase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0572 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_287 FBDBKF_06835 31504 32148 1 udk uridine kinase Morganella morganii S1
1 group_287 EHELCC_04135 154038 154682 -1 udk uridine kinase Morganella morganii S2
2 group_287 NLDBIP_04135 153834 154478 -1 udk uridine kinase Morganella morganii S4
3 group_287 LHKJJB_09965 153948 154592 -1 udk uridine kinase Morganella morganii S3
4 group_287 HKOGLL_09010 36460 37104 1 udk uridine kinase Morganella morganii S5
5 group_287 F4V73_RS00985 210166 210810 1 udk uridine kinase Morganella psychrotolerans
6 group_287 PMI_RS03195 705802 706443 1 udk uridine kinase Proteus mirabilis HI4320
7 group_287 PMI_RS04770 1049452 1049994 -1 hypothetical protein Proteus mirabilis HI4320