Orthogroup:group_2619


Homologs in group_2619

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03835 FBDBKF_03835 Morganella morganii S1 xerD Site-specific recombinase XerD
EHELCC_06700 EHELCC_06700 Morganella morganii S2 xerD Site-specific recombinase XerD
NLDBIP_07025 NLDBIP_07025 Morganella morganii S4 xerD Site-specific recombinase XerD
LHKJJB_06560 LHKJJB_06560 Morganella morganii S3 xerD Site-specific recombinase XerD
HKOGLL_04370 HKOGLL_04370 Morganella morganii S5 xerD Site-specific recombinase XerD
PMI_RS12610 PMI_RS12610 Proteus mirabilis HI4320 - site-specific integrase

Distribution of group_2619 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2619 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2619

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2619.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 xerD 5
2 - 1

Product

# Product Occurence
1 Site-specific recombinase XerD 5
2 site-specific integrase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4974 6 L Replication, recombination and repair (L) Site-specific recombinase XerD

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00589 6 Phage integrase family

Annotations of the 95 SwissProt hits

Annotation Number of occurrences
Putative integrase/recombinase y4gC 1
Putative integrase/recombinase y4rF 1
Putative tyrosine recombinase XerC 2
Type 1 fimbriae regulatory protein FimE 3
Tyrosine recombinase EUBREC_2677 1
Tyrosine recombinase Tlet_1492 1
Tyrosine recombinase XerA 7
Tyrosine recombinase XerC 54
Tyrosine recombinase XerD 7
Tyrosine recombinase XerH 1
Tyrosine recombinase XerS 17

Protein length

Unique protein length 356

Protein length distribution