Orthogroup:group_2542


Homologs in group_2542

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02475 FBDBKF_02475 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_02945 EHELCC_02945 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_00515 NLDBIP_00515 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_01520 LHKJJB_01520 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_01560 HKOGLL_01560 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
F4V73_RS04850 F4V73_RS04850 Morganella psychrotolerans - DMT family transporter

Distribution of group_2542 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2542 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2542

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2542.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhaT 5
2 - 1

Product

# Product Occurence
1 Permease of the drug/metabolite transporter (DMT) superfamily 5
2 DMT family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0697 6 GER Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 Permease of the drug/metabolite transporter (DMT) superfamily

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 6 EamA-like transporter family

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Uncharacterized transporter YdeK 1
Uncharacterized transporter YoaV 1
Uncharacterized transporter YyaM 1

Protein length

Min length 293
Max length 294
Mean length (sd) 293.8 (0.4)
Median length 294.0

Protein length distribution