Orthogroup:group_2539


Homologs in group_2539

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02455 FBDBKF_02455 Morganella morganii S1 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
EHELCC_02925 EHELCC_02925 Morganella morganii S2 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
NLDBIP_00535 NLDBIP_00535 Morganella morganii S4 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
LHKJJB_01500 LHKJJB_01500 Morganella morganii S3 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
HKOGLL_01540 HKOGLL_01540 Morganella morganii S5 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
F4V73_RS04830 F4V73_RS04830 Morganella psychrotolerans - Crp/Fnr family transcriptional regulator

Distribution of group_2539 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2539 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2539

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2539.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 crp 5
2 - 1

Product

# Product Occurence
1 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 5
2 Crp/Fnr family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0664 6 T Signal transduction mechanisms (T) cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00027 6 Cyclic nucleotide-binding domain

Annotations of the 38 SwissProt hits

Annotation Number of occurrences
CRP-like cAMP-activated global transcriptional regulator 2
CRP-like protein Clp 8
Cyclic AMP receptor protein 1
DNA-binding transcriptional dual regulator CRP 1
Lysophospholipase NTE1 7
Lysophospholipase nte1 5
Uncharacterized ABC transporter ATP-binding protein MT2640 1
Uncharacterized ABC transporter ATP-binding protein Mb2593 1
Uncharacterized ABC transporter ATP-binding protein Rv2564 1
cAMP-activated global transcriptional regulator CRP 7
cAMP-activated global transcriptional regulator Vfr 1
cAMP-dependent protein kinase regulatory subunit 1
cAMP-dependent protein kinase type II-alpha regulatory subunit 2

Protein length

Min length 218
Max length 219
Mean length (sd) 218.2 (0.4)
Median length 218.0

Protein length distribution