Orthogroup:group_2467



Homologs in group_2467

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00170 FBDBKF_00170 Morganella morganii S1 - Sel1 repeat family protein
EHELCC_01375 EHELCC_01375 Morganella morganii S2 - Sel1 repeat family protein
NLDBIP_02085 NLDBIP_02085 Morganella morganii S4 - Sel1 repeat family protein
LHKJJB_03600 LHKJJB_03600 Morganella morganii S3 - Sel1 repeat family protein
HKOGLL_03445 HKOGLL_03445 Morganella morganii S5 - Sel1 repeat family protein
PMI_RS00035 PMI_RS00035 Proteus mirabilis HI4320 - SEL1-like repeat protein

Distribution of group_2467 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2467 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2467

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2467.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 Sel1 repeat family protein 5
2 SEL1-like repeat protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0790 6 R General function prediction only (R) TPR repeat

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07126 6 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08238 6 Sel1 repeat

Annotations of the 68 SwissProt hits

Annotation Number of occurrences
Activator of C kinase protein 1 1
Beta-lactamase HcpA 2
Beta-lactamase HcpB 1
Chitin synthase regulator 2 1
Chitin synthase regulator SKT5 2
Chitin synthase regulatory factor 1 1
Chitin synthase regulatory factor 2 1
Chitin synthase regulatory factor 3 1
Chitin synthase regulatory factor 4 1
Cytochrome c oxidase assembly factor 7 4
Cytochrome c oxidase assembly factor 7A 1
Cytochrome c oxidase assembly factor 7B 1
DAP3-binding cell death enhancer 1 3
ERAD-associated E3 ubiquitin-protein ligase component HRD3 3
ERAD-associated E3 ubiquitin-protein ligase component HRD3A 1
ERAD-associated E3 ubiquitin-protein ligase component HRD3B 1
Exopolysaccharide production negative regulator 1
F-box protein At1g70590 1
LRP2-binding protein 6
Localization factor PodJL 2
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 2
Protein SHC1 2
Protein sel-1 homolog 1 4
Protein sel-1 homolog 2 3
Protein sel-1 homolog 3 2
Putative beta-lactamase HcpC 2
Putative beta-lactamase HcpD 2
Putative beta-lactamase HcpE 2
Putative sel1-like repeat-containing protein L18 1
Putative sel1-like repeat-containing protein L21 1
Putative sel1-like repeat-containing protein R815 1
Putative sel1-like repeat-containing protein R850 1
Secretory immunoglobulin A-binding protein EsiB 1
Sel1-repeat-containing protein YbeQ 1
Sel1-repeat-containing protein YbeT 1
Sel1-repeat-containing protein YjcO 1
Sodium-type polar flagellar protein MotX 1
Uncharacterized Sel1-like repeat-containing protein C1B3.10c 1
Uncharacterized protein HI_1625 1
Uncharacterized protein NMB1327 1
Uncharacterized protein YjcO 2

Protein length

Min length 234
Max length 327
Mean length (sd) 249.5 (38.0)
Median length 234.0

Protein length distribution