Orthogroup:group_2450


Homologs in group_2450

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20505 FBDBKF_20505 Morganella morganii S1 - MmcQ-like protein
EHELCC_19790 EHELCC_19790 Morganella morganii S2 - MmcQ-like protein
NLDBIP_19835 NLDBIP_19835 Morganella morganii S4 - MmcQ-like protein
LHKJJB_19790 LHKJJB_19790 Morganella morganii S3 - MmcQ-like protein
HKOGLL_19675 HKOGLL_19675 Morganella morganii S5 - MmcQ-like protein
F4V73_RS01625 F4V73_RS01625 Morganella psychrotolerans - MmcQ/YjbR family DNA-binding protein
PMI_RS04800 PMI_RS04800 Proteus mirabilis HI4320 - MmcQ/YjbR family DNA-binding protein

Distribution of group_2450 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2450 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2450

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2450.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 MmcQ-like protein 5
2 MmcQ/YjbR family DNA-binding protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2315 7 K Transcription (K) Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04237 7 YjbR

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein YbdF 2
Uncharacterized protein YjbR 2
Uncharacterized protein YyaQ 1

Protein length

Min length 75
Max length 119
Mean length (sd) 87.4 (21.2)
Median length 75.0

Protein length distribution