Orthogroup:group_2415


Homologs in group_2415

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19505 FBDBKF_19505 Morganella morganii S1 metH methionine synthase
EHELCC_16450 EHELCC_16450 Morganella morganii S2 metH methionine synthase
NLDBIP_16660 NLDBIP_16660 Morganella morganii S4 metH methionine synthase
LHKJJB_16810 LHKJJB_16810 Morganella morganii S3 metH methionine synthase
HKOGLL_18805 HKOGLL_18805 Morganella morganii S5 metH methionine synthase
F4V73_RS18620 F4V73_RS18620 Morganella psychrotolerans metH methionine synthase
PMI_RS13595 PMI_RS13595 Proteus mirabilis HI4320 metH methionine synthase

Distribution of group_2415 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2415 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2415

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2415.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metH 7

Product

# Product Occurence
1 methionine synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0646 5 E Amino acid transport and metabolism (E) Methionine synthase I (cobalamin-dependent), methyltransferase domain
COG1410 2 E Amino acid transport and metabolism (E) Methionine synthase I, cobalamin-binding domain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00809 7 Pterin binding enzyme
PF02310 7 B12 binding domain
PF02574 7 Homocysteine S-methyltransferase
PF02607 7 B12 binding domain
PF02965 7 Vitamin B12 dependent methionine synthase, activation domain

Annotations of the 69 SwissProt hits

Annotation Number of occurrences
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase 1
Betaine--homocysteine S-methyltransferase 1 7
Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 1
Corrinoid protein DSY3155 1
Dimethylamine corrinoid protein 1
Dimethylamine corrinoid protein 1 2
Dimethylamine corrinoid protein 2 2
Dimethylamine corrinoid protein 3 2
Homocysteine S-methyltransferase 1
Homocysteine S-methyltransferase 1 3
Homocysteine S-methyltransferase 2 2
Homocysteine S-methyltransferase 3 2
Homocysteine S-methyltransferase 4 1
Homocysteine S-methyltransferase YbgG 1
Methanol--corrinoid protein 1
Methionine synthase 17
Methionine synthase (Fragment) 1
Methylated-thiol--corrinoid protein MtsB 2
Methylcorrinoid:tetrahydrofolate methyltransferase 1
Monomethylamine corrinoid protein 1 3
Monomethylamine corrinoid protein 2 3
Probable methionine synthase 2
Quaternary-amine-specific corrinoid protein 1
S-methylmethionine--homocysteine S-methyltransferase BHMT2 3
Selenocysteine Se-methyltransferase 1
Selenocysteine methyltransferase 1
Trimethylamine corrinoid protein 1
Trimethylamine corrinoid protein 1 2
Trimethylamine corrinoid protein 2 2
Uncharacterized protein HI_1042 1

Protein length

Min length 1223
Max length 1226
Mean length (sd) 1225.6 (1.1)
Median length 1226.0

Protein length distribution