Orthogroup:group_2407



Homologs in group_2407

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19285 FBDBKF_19285 Morganella morganii S1 hybD HyaD/HybD family hydrogenase maturation endopeptidase
EHELCC_07570 EHELCC_07570 Morganella morganii S2 hybD HyaD/HybD family hydrogenase maturation endopeptidase
NLDBIP_07895 NLDBIP_07895 Morganella morganii S4 hybD HyaD/HybD family hydrogenase maturation endopeptidase
LHKJJB_07430 LHKJJB_07430 Morganella morganii S3 hybD HyaD/HybD family hydrogenase maturation endopeptidase
HKOGLL_03500 HKOGLL_03500 Morganella morganii S5 hybD HyaD/HybD family hydrogenase maturation endopeptidase
F4V73_RS12045 F4V73_RS12045 Morganella psychrotolerans - HyaD/HybD family hydrogenase maturation endopeptidase
PMI_RS00170 PMI_RS00170 Proteus mirabilis HI4320 - HyaD/HybD family hydrogenase maturation endopeptidase

Distribution of group_2407 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2407 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2407

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2407.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hybD 5
2 - 2

Product

# Product Occurence
1 HyaD/HybD family hydrogenase maturation endopeptidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0680 7 C Energy production and conversion (C) Ni,Fe-hydrogenase maturation factor

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03605 7 hydrogenase maturation protease [EC:3.4.23.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01750 7 Hydrogenase maturation protease

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
Coenzyme F420 hydrogenase subunit delta 2
Hydrogenase 1 maturation protease 1
Hydrogenase 2 maturation protease 1
Hydrogenase expression/formation protein HoxM 2
Hydrogenase expression/formation protein HupD 4
Hydrogenase expression/formation protein HupM 1
Protein HydD 1
Putative hydrogenase maturation protease MJ0253 1
Putative hydrogenase maturation protease MJ0631 1

Protein length

Min length 162
Max length 164
Mean length (sd) 163.7 (0.8)
Median length 164.0

Protein length distribution