Orthogroup:group_2400


Homologs in group_2400

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19250 FBDBKF_19250 Morganella morganii S1 rpsJ_V57L 30S ribosomal protein S10
EHELCC_18995 EHELCC_18995 Morganella morganii S2 rpsJ_V57L 30S ribosomal protein S10
NLDBIP_19010 NLDBIP_19010 Morganella morganii S4 rpsJ_V57L 30S ribosomal protein S10
LHKJJB_18865 LHKJJB_18865 Morganella morganii S3 rpsJ_V57L 30S ribosomal protein S10
HKOGLL_18600 HKOGLL_18600 Morganella morganii S5 rpsJ_V57L 30S ribosomal protein S10
F4V73_RS18915 F4V73_RS18915 Morganella psychrotolerans rpsJ 30S ribosomal protein S10
PMI_RS16145 PMI_RS16145 Proteus mirabilis HI4320 rpsJ 30S ribosomal protein S10

Distribution of group_2400 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2400 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2400

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2400.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsJ_V57L 5
2 rpsJ 2

Product

# Product Occurence
1 30S ribosomal protein S10 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0051 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S10

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02946 7 small subunit ribosomal protein S10 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00338 7 Ribosomal protein S10p/S20e

Annotations of the 500 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein uS10 500

Protein length

Unique protein length 103

Protein length distribution