Orthogroup:group_238



Homologs in group_238

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01805 FBDBKF_01805 Morganella morganii S1 cydB cytochrome d ubiquinol oxidase subunit II
EHELCC_02275 EHELCC_02275 Morganella morganii S2 cydB cytochrome d ubiquinol oxidase subunit II
NLDBIP_01185 NLDBIP_01185 Morganella morganii S4 cydB cytochrome d ubiquinol oxidase subunit II
LHKJJB_00850 LHKJJB_00850 Morganella morganii S3 cydB cytochrome d ubiquinol oxidase subunit II
HKOGLL_00890 HKOGLL_00890 Morganella morganii S5 cydB cytochrome d ubiquinol oxidase subunit II
F4V73_RS04130 F4V73_RS04130 Morganella psychrotolerans cydB cytochrome d ubiquinol oxidase subunit II
PMI_RS06945 PMI_RS06945 Proteus mirabilis HI4320 cydB cytochrome d ubiquinol oxidase subunit II
PMI_RS11755 PMI_RS11755 Proteus mirabilis HI4320 cydB cytochrome d ubiquinol oxidase subunit II

Distribution of group_238 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_238 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_238

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_238.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cydB 8

Product

# Product Occurence
1 cytochrome d ubiquinol oxidase subunit II 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1294 8 C Energy production and conversion (C) Cytochrome bd-type quinol oxidase, subunit 2

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00426 8 cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] Oxidative phosphorylation
Two-component system
Cytochrome bd ubiquinol oxidase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02322 8 Cytochrome bd terminal oxidase subunit II

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Cytochrome bd ubiquinol oxidase subunit 2 1
Cytochrome bd-I ubiquinol oxidase subunit 2 3
Cytochrome bd-II ubiquinol oxidase subunit 2 1
Probable cytochrome oxidase subunit 2 1

Protein length

Unique protein length 335

Protein length distribution