Homologs in group_253

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03575 FBDBKF_03575 77.7 Morganella morganii S1 gldA Glycerol dehydrogenase or related enzyme, iron-containing ADH family
EHELCC_06960 EHELCC_06960 77.7 Morganella morganii S2 gldA Glycerol dehydrogenase or related enzyme, iron-containing ADH family
NLDBIP_07285 NLDBIP_07285 77.7 Morganella morganii S4 gldA Glycerol dehydrogenase or related enzyme, iron-containing ADH family
LHKJJB_06820 LHKJJB_06820 77.7 Morganella morganii S3 gldA Glycerol dehydrogenase or related enzyme, iron-containing ADH family
HKOGLL_04110 HKOGLL_04110 77.7 Morganella morganii S5 gldA Glycerol dehydrogenase or related enzyme, iron-containing ADH family
F4V73_RS11320 F4V73_RS11320 76.3 Morganella psychrotolerans - glycerol dehydrogenase
PMI_RS13635 PMI_RS13635 47.1 Proteus mirabilis HI4320 - glycerol dehydrogenase

Distribution of the homologs in the orthogroup group_253

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_253

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45511 1.26e-172 488 64 1 366 1 dhaD Glycerol dehydrogenase Citrobacter freundii
P0A9S5 1.14e-147 424 58 1 366 1 gldA Glycerol dehydrogenase Escherichia coli (strain K12)
P0A9S6 1.14e-147 424 58 1 366 3 gldA Glycerol dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P50173 1.58e-132 386 55 1 366 3 gldA Glycerol dehydrogenase Pseudomonas putida
Q9WYQ4 6.77e-121 356 51 4 364 1 gldA Glycerol dehydrogenase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P32816 2.15e-119 353 50 3 364 1 gldA Glycerol dehydrogenase Geobacillus stearothermophilus
Q9HHR2 9.78e-112 333 47 2 363 1 VNG_6270G Glycolaldehyde reductase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
O13702 1.98e-95 294 42 4 365 1 gld1 Glycerol dehydrogenase 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P74246 1.1e-49 174 31 3 348 3 slr1167 Uncharacterized oxidoreductase slr1167 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P45579 4.22e-29 119 30 11 362 1 hcxA Hydroxycarboxylate dehydrogenase A Escherichia coli (strain K12)
A2ST19 3.8e-23 102 28 10 318 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z)
A7I9R4 7.19e-20 92 27 10 361 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8)
Q0W4M8 1.33e-19 92 24 8 315 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)
Q5JH91 6.1e-19 90 26 9 316 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q8TJU1 1.5e-18 89 25 9 319 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
A4YIZ1 1.81e-18 89 30 6 248 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
Q12X59 3.59e-18 88 25 8 317 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Q46FR7 5.17e-18 87 26 10 321 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanosarcina barkeri (strain Fusaro / DSM 804)
C6A2E4 6.25e-18 87 26 9 305 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Thermococcus sibiricus (strain DSM 12597 / MM 739)
Q8PZA4 2.01e-17 85 27 11 325 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
A4WLW1 6.55e-17 84 27 8 318 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321 / PZ6)
Q8U147 2.78e-16 82 29 6 248 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
B8GGP5 2.86e-16 82 26 10 315 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
Q2FPC7 3e-16 82 27 11 305 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)
A3MTM6 3.57e-16 82 29 10 312 1 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1)
Q8ZWP5 4.19e-16 82 28 10 321 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2)
O59144 6.72e-16 81 25 8 319 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
A0B5P3 1.08e-15 80 24 9 317 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT)
A1RV58 1.7e-15 80 31 7 234 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
A3DN28 1.71e-15 80 27 9 320 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Q4JB01 3.59e-15 79 26 7 293 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
A8ABP9 3.94e-15 79 33 8 245 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Q8TW08 1.39e-14 77 25 9 323 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
A3CX71 2.3e-14 77 27 10 315 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Q6L0R7 3.61e-14 76 23 11 335 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3)
B1YCY7 1.5e-13 74 31 7 234 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / NBRC 100436 / V24Sta)
C3MQ22 1.74e-13 74 25 11 344 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)
Q58122 1.75e-13 73 25 7 248 1 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
C3NEA4 3.94e-13 73 25 11 344 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1)
C3NHE5 3.94e-13 73 25 11 344 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2)
A5UJW3 7.45e-13 72 24 8 318 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
C3MVE1 8.89e-13 72 25 12 345 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)
C4KHB6 8.89e-13 72 25 12 345 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)
C3N5P0 8.89e-13 72 25 12 345 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfolobus islandicus (strain M.16.27)
A1RZJ9 1.16e-12 71 25 6 267 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Thermofilum pendens (strain DSM 2475 / Hrk 5)
Q9V0V0 1.28e-12 71 27 5 226 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Pyrococcus abyssi (strain GE5 / Orsay)
Q9YER2 1.39e-12 71 29 10 256 1 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
A2BN26 2.81e-12 70 26 9 343 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5)
Q9HJ16 5.93e-12 69 25 10 323 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q3ING6 7e-12 69 25 5 248 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Natronomonas pharaonis (strain ATCC 35678 / DSM 2160 / CIP 103997 / JCM 8858 / NBRC 14720 / NCIMB 2260 / Gabara)
A9A2U8 1.03e-11 68 25 7 260 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Nitrosopumilus maritimus (strain SCM1)
Q2NFL8 1.68e-11 68 24 5 247 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
Q9UXE7 2.81e-11 67 25 12 345 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Q5V5G2 2.93e-11 67 25 7 286 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
A0RXV2 4.68e-11 67 24 10 329 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Cenarchaeum symbiosum (strain A)
Q18JW6 1.01e-10 65 28 5 242 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Q979B1 1.59e-10 65 26 10 290 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
A6VIL2 4.63e-10 63 24 8 240 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
B9LUA0 5.5e-10 63 26 7 288 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34)
A8MC03 2.25e-09 62 22 11 328 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167)
A6UUD2 2.84e-09 61 25 7 242 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
B1L7K1 5.71e-08 57 25 6 244 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Korarchaeum cryptofilum (strain OPF8)
Q6M0P4 1.47e-07 56 27 11 240 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
Q9HS49 6.56e-07 54 25 6 251 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R3A6 6.56e-07 54 25 6 251 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
P58460 7.94e-07 53 27 11 350 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q5WL08 1.16e-06 53 22 10 279 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Shouchella clausii (strain KSM-K16)
Q9XDN0 3.11e-06 52 28 11 238 1 pduQ 1-propanol dehydrogenase PduQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B1VB76 3.11e-06 52 27 11 237 3 pduQ 1-propanol dehydrogenase PduQ Citrobacter freundii
P41795 1.55e-05 50 28 6 200 2 eutG Probable alcohol dehydrogenase EutG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A4FZY2 8.11e-05 47 25 10 240 3 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
O28599 0.000169 47 24 9 273 1 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P31005 0.000209 46 24 8 271 1 mdh NAD-dependent methanol dehydrogenase Bacillus methanolicus
P72010 0.000303 45 23 8 318 1 egsA Glycerol-1-phosphate dehydrogenase [NAD(P)+] Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17885
Feature type CDS
Gene -
Product glycerol dehydrogenase
Location 3929757 - 3930860 (strand: -1)
Length 1104 (nucleotides) / 367 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_253
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00465 Iron-containing alcohol dehydrogenase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0371 Energy production and conversion (C) C Glycerol dehydrogenase or related enzyme, iron-containing ADH family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00005 glycerol dehydrogenase [EC:1.1.1.6] Glycerolipid metabolism
Propanoate metabolism
Metabolic pathways		 -

Protein Sequence

MLKVIQSPAKYIQGPDALYHIGKYTKPLGERALIIADKFVMDLAGSIVKDSMTQYEVNGHFEQFHGECTHKEIDRLVEIAKQQAALVIIGVGGGKTLDTAKAVAYKCQLPVVISPTIASTDAPTSALSVIYTELGAFDSYLFYPKNPDIVVMDTNVIASAPPRLLVAGMGDALATYFEARACSRAQKQTMAGGKTTLAALALAELCYHTLLEDGYKAKLAVSRSVCTTAVENIIEANTFLSGIGFESAGLAAAHAIHNGFTALEECHAMYHGEKVAFGTLVQLVLENSPLEEIEEVLDFCVQVGLPVTLEELGVHATGDELNEKIMAVAELSCAEGETIYNMPFDVDSDKVFAAIMAADQLGREWLY

Flanking regions ( +/- flanking 50bp)

TTCCCCGCCATAAAGATTTTTTACTCTTTTGAAGATAGTAGGAGTCTATTATGTTAAAAGTTATTCAATCCCCAGCGAAGTATATCCAAGGGCCTGATGCGTTATATCATATTGGGAAATATACAAAACCTTTGGGTGAGAGAGCATTGATTATCGCTGATAAGTTTGTCATGGATCTGGCTGGCAGCATCGTCAAAGACAGCATGACACAGTATGAAGTCAATGGACACTTTGAACAGTTTCACGGTGAATGTACACATAAAGAGATTGACCGCTTAGTTGAGATAGCCAAACAACAAGCCGCTCTTGTTATCATTGGTGTTGGGGGAGGAAAAACCCTTGATACCGCCAAAGCCGTCGCCTATAAATGCCAGTTACCTGTGGTGATCTCTCCGACTATCGCATCAACCGATGCTCCTACTAGCGCACTTTCTGTTATTTATACAGAATTAGGCGCATTTGATAGCTATCTTTTCTACCCGAAAAATCCTGATATCGTTGTTATGGATACCAATGTAATTGCCTCAGCACCACCACGTTTATTAGTGGCAGGGATGGGAGATGCCTTAGCGACCTATTTTGAAGCAAGAGCCTGTAGTCGAGCACAAAAGCAAACAATGGCTGGAGGTAAAACCACCCTTGCAGCACTGGCATTAGCAGAGCTTTGTTATCACACCCTACTTGAAGATGGCTATAAAGCCAAACTGGCTGTCAGCCGTAGTGTGTGTACTACTGCGGTTGAAAATATTATCGAAGCAAATACCTTTTTAAGCGGTATTGGTTTTGAAAGTGCCGGATTAGCCGCCGCACATGCAATACATAATGGTTTCACTGCATTAGAAGAGTGCCATGCAATGTATCACGGTGAAAAAGTCGCCTTTGGTACTCTAGTTCAACTAGTGCTAGAAAATAGCCCGTTAGAAGAGATCGAAGAAGTACTCGATTTCTGTGTTCAAGTTGGCTTACCTGTTACCTTAGAAGAATTAGGCGTACATGCTACAGGTGATGAATTAAATGAAAAAATCATGGCTGTCGCAGAATTAAGCTGTGCAGAAGGTGAAACAATTTACAATATGCCATTTGATGTTGATTCCGATAAAGTGTTTGCGGCGATTATGGCAGCAGACCAATTAGGGCGTGAGTGGTTATATTAAAGATTAATATTAATGGCGCCAACAGGGTGCTCTGTACCCTGTTGACTCAC