Orthogroup:group_2362


Homologs in group_2362

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19060 FBDBKF_19060 Morganella morganii S1 aroE shikimate dehydrogenase
EHELCC_18805 EHELCC_18805 Morganella morganii S2 aroE shikimate dehydrogenase
NLDBIP_18820 NLDBIP_18820 Morganella morganii S4 aroE shikimate dehydrogenase
LHKJJB_18675 LHKJJB_18675 Morganella morganii S3 aroE shikimate dehydrogenase
HKOGLL_18410 HKOGLL_18410 Morganella morganii S5 aroE shikimate dehydrogenase
F4V73_RS19105 F4V73_RS19105 Morganella psychrotolerans aroE shikimate dehydrogenase
PMI_RS16330 PMI_RS16330 Proteus mirabilis HI4320 aroE shikimate dehydrogenase

Distribution of group_2362 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2362 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2362

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2362.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 aroE 7

Product

# Product Occurence
1 shikimate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0169 7 E Amino acid transport and metabolism (E) Shikimate 5-dehydrogenase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01488 7 Shikimate / quinate 5-dehydrogenase
PF08501 7 Shikimate dehydrogenase substrate binding domain
PF18317 7 Shikimate 5'-dehydrogenase C-terminal domain

Annotations of the 523 SwissProt hits

Annotation Number of occurrences
Pentafunctional AROM polypeptide 51
Pentafunctional AROM polypeptide 1 2
Pentafunctional AROM polypeptide 2 2
Quinate/shikimate dehydrogenase 28
Shikimate dehydrogenase (NADP(+)) 440

Protein length

Min length 271
Max length 274
Mean length (sd) 272.1 (0.9)
Median length 272.0

Protein length distribution