Orthogroup:group_2305


Homologs in group_2305

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17705 FBDBKF_17705 Morganella morganii S1 purD Phosphoribosylamine-glycine ligase
EHELCC_18190 EHELCC_18190 Morganella morganii S2 purD Phosphoribosylamine-glycine ligase
NLDBIP_17960 NLDBIP_17960 Morganella morganii S4 purD Phosphoribosylamine-glycine ligase
LHKJJB_18155 LHKJJB_18155 Morganella morganii S3 purD Phosphoribosylamine-glycine ligase
HKOGLL_18045 HKOGLL_18045 Morganella morganii S5 purD Phosphoribosylamine-glycine ligase
F4V73_RS15085 F4V73_RS15085 Morganella psychrotolerans purD phosphoribosylamine--glycine ligase
PMI_RS13675 PMI_RS13675 Proteus mirabilis HI4320 purD phosphoribosylamine--glycine ligase

Distribution of group_2305 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2305 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2305

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2305.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 purD 7

Product

# Product Occurence
1 Phosphoribosylamine-glycine ligase 5
2 phosphoribosylamine--glycine ligase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0151 7 F Nucleotide transport and metabolism (F) Phosphoribosylamine-glycine ligase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01945 7 phosphoribosylamine---glycine ligase [EC:6.3.4.13] Purine metabolism
Metabolic pathways
Biosynthesis of secondary metabolites		 De novo purine biosynthesis, PRPP + glutamine => IMP

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01071 7 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
PF02843 7 Phosphoribosylglycinamide synthetase, C domain
PF02844 7 Phosphoribosylglycinamide synthetase, N domain

Annotations of the 135 SwissProt hits

Annotation Number of occurrences
Bifunctional purine biosynthetic protein ADE1 2
Bifunctional purine biosynthetic protein ADE5,7 2
Bifunctional purine biosynthetic protein PUR2,5 1
Bifunctional purine biosynthetic protein purD 1
Bifunctional purine synthesis protein purC/E 1
Carbamoyl phosphate synthase large chain 13
D-alanine--D-alanine ligase 2
Phosphoribosylamine--glycine ligase 103
Phosphoribosylamine--glycine ligase (Fragment) 1
Phosphoribosylamine--glycine ligase, chloroplastic 1
Propionyl-CoA carboxylase alpha chain 1
Trifunctional purine biosynthetic protein adenosine-3 7

Protein length

Min length 427
Max length 429
Mean length (sd) 427.3 (0.8)
Median length 427.0

Protein length distribution