Orthogroup:group_225


Homologs in group_225

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00605 FBDBKF_00605 Morganella morganii S1 fliI flagellar protein export ATPase FliI
EHELCC_00940 EHELCC_00940 Morganella morganii S2 fliI flagellar protein export ATPase FliI
NLDBIP_02520 NLDBIP_02520 Morganella morganii S4 fliI flagellar protein export ATPase FliI
LHKJJB_04035 LHKJJB_04035 Morganella morganii S3 fliI flagellar protein export ATPase FliI
HKOGLL_03010 HKOGLL_03010 Morganella morganii S5 fliI flagellar protein export ATPase FliI
F4V73_RS06615 F4V73_RS06615 Morganella psychrotolerans fliI flagellar protein export ATPase FliI
F4V73_RS08315 F4V73_RS08315 Morganella psychrotolerans - FliI/YscN family ATPase
PMI_RS07975 PMI_RS07975 Proteus mirabilis HI4320 fliI flagellar protein export ATPase FliI

Distribution of group_225 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_225 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_225

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_225.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fliI 7
2 - 1

Product

# Product Occurence
1 flagellar protein export ATPase FliI 7
2 FliI/YscN family ATPase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1157 8 NU Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 Flagellar biosynthesis/type III secretory pathway ATPase FliI

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02412 7 flagellum-specific ATP synthase [EC:7.4.2.8] Flagellar assembly -
K03224 1 ATP synthase in type III secretion protein N [EC:7.4.2.8] Bacterial secretion system EHEC/EPEC pathogenicity signature, T3SS and effectors
Xanthomonas spp. pathogenicity signature, T3SS and effectors

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00006 8 ATP synthase alpha/beta family, nucleotide-binding domain
PF02874 1 ATP synthase alpha/beta family, beta-barrel domain
PF18269 8 T3SS EscN ATPase C-terminal domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG002331 1 flagellum-specific ATP synthase FliI VF0394 Motility
VFG023641 6 flagellum-specific ATP synthase FliI VF0394 Motility
VFG042265 1 AscN VF0479 Effector delivery system

Annotations of the 836 SwissProt hits

Annotation Number of occurrences
ATP synthase subunit alpha 86
ATP synthase subunit alpha 1 3
ATP synthase subunit alpha 2 16
ATP synthase subunit beta 540
ATP synthase subunit beta (Fragment) 1
ATP synthase subunit beta 1 30
ATP synthase subunit beta 2 21
ATP synthase subunit beta 3 1
ATP synthase subunit beta, chloroplastic 20
ATP synthase subunit beta, chloroplastic (Fragment) 1
ATP synthase subunit beta, mitochondrial 21
ATP synthase subunit beta, plastid 1
ATP synthase subunit beta, sodium ion specific 1
ATP synthase subunit beta-1, mitochondrial 1
ATP synthase subunit beta-2, mitochondrial 1
ATP synthase subunit beta-3, mitochondrial 1
Flagellum-specific ATP synthase 16
SPI-1 type 3 secretion system ATPase 2
SPI-2 type 3 secretion system ATPase 1
Type 3 secretion system ATPase 10
V-type ATP synthase beta chain 60
V-type ATP synthase beta chain 2 1
V-type ATP synthase beta chain 3 1

Protein length

Min length 439
Max length 457
Mean length (sd) 452.5 (5.6)
Median length 454.0

Protein length distribution