Orthogroup:group_2244


Homologs in group_2244

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17170 FBDBKF_17170 Morganella morganii S1 mscS Small-conductance mechanosensitive channel
EHELCC_01720 EHELCC_01720 Morganella morganii S2 mscS Small-conductance mechanosensitive channel
NLDBIP_01740 NLDBIP_01740 Morganella morganii S4 mscS Small-conductance mechanosensitive channel
LHKJJB_00295 LHKJJB_00295 Morganella morganii S3 mscS Small-conductance mechanosensitive channel
HKOGLL_00335 HKOGLL_00335 Morganella morganii S5 mscS Small-conductance mechanosensitive channel
F4V73_RS05925 F4V73_RS05925 Morganella psychrotolerans - mechanosensitive ion channel
PMI_RS08340 PMI_RS08340 Proteus mirabilis HI4320 - mechanosensitive ion channel family protein

Distribution of group_2244 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2244 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2244

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2244.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mscS 5
2 - 2

Product

# Product Occurence
1 Small-conductance mechanosensitive channel 5
2 mechanosensitive ion channel 1
3 mechanosensitive ion channel family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0668 7 M Cell wall/membrane/envelope biogenesis (M) Small-conductance mechanosensitive channel

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16053 7 miniconductance mechanosensitive channel - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00924 7 Mechanosensitive ion channel, beta-domain
PF21082 1 Mechanosensitive ion channel MscS, C-terminal

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Low conductance mechanosensitive channel YnaI 2
Miniconductance mechanosensitive channel YbdG 2
Small-conductance mechanosensitive channel MscMJ 1
Uncharacterized MscS family protein HP_0415 1
Uncharacterized MscS family protein YhdY 1
Uncharacterized MscS family protein aq_812 1
Uncharacterized MscS family protein jhp_0969 1

Protein length

Min length 418
Max length 430
Mean length (sd) 426.1 (3.8)
Median length 427.0

Protein length distribution