COG0043


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0043, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 3-polyprenyl-4-hydroxybenzoate decarboxylase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0043 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2209 FBDBKF_16900 8631 10103 -1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Morganella morganii S1
1 group_2209 EHELCC_19530 1355 2827 1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Morganella morganii S2
2 group_2209 NLDBIP_16900 58407 59879 1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Morganella morganii S4
3 group_2209 LHKJJB_16570 8631 10103 -1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Morganella morganii S3
4 group_2209 HKOGLL_17535 8631 10103 -1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Morganella morganii S5
5 group_2209 F4V73_RS18370 8744 10216 -1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Morganella psychrotolerans
6 group_2209 PMI_RS17625 3866467 3867936 1 ubiD 4-hydroxy-3-polyprenylbenzoate decarboxylase Proteus mirabilis HI4320