Orthogroup:group_2243


Homologs in group_2243

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17165 FBDBKF_17165 Morganella morganii S1 hdeD HdeD family acid-resistance protein
EHELCC_01725 EHELCC_01725 Morganella morganii S2 hdeD HdeD family acid-resistance protein
NLDBIP_01735 NLDBIP_01735 Morganella morganii S4 hdeD HdeD family acid-resistance protein
LHKJJB_00300 LHKJJB_00300 Morganella morganii S3 hdeD HdeD family acid-resistance protein
HKOGLL_00340 HKOGLL_00340 Morganella morganii S5 hdeD HdeD family acid-resistance protein
F4V73_RS05920 F4V73_RS05920 Morganella psychrotolerans - HdeD family acid-resistance protein
PMI_RS08330 PMI_RS08330 Proteus mirabilis HI4320 - HdeD family acid-resistance protein

Distribution of group_2243 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2243 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2243

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2243.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hdeD 5
2 - 2

Product

# Product Occurence
1 HdeD family acid-resistance protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3247 7 R General function prediction only (R) Acid resistance membrane protein HdeD, DUF308 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K21908 7 membrane protein HdeD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03729 7 Short repeat of unknown function (DUF308)

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Protein HdeD 3

Protein length

Min length 190
Max length 192
Mean length (sd) 190.3 (0.8)
Median length 190.0

Protein length distribution