Orthogroup:group_2227


Homologs in group_2227

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17035 FBDBKF_17035 Morganella morganii S1 - DksA/TraR family C4-type zinc finger protein
EHELCC_16555 EHELCC_16555 Morganella morganii S2 - DksA/TraR family C4-type zinc finger protein
NLDBIP_16765 NLDBIP_16765 Morganella morganii S4 - DksA/TraR family C4-type zinc finger protein
LHKJJB_16705 LHKJJB_16705 Morganella morganii S3 - DksA/TraR family C4-type zinc finger protein
HKOGLL_17670 HKOGLL_17670 Morganella morganii S5 - DksA/TraR family C4-type zinc finger protein
F4V73_RS18515 F4V73_RS18515 Morganella psychrotolerans - DksA/TraR family C4-type zinc finger protein
PMI_RS11925 PMI_RS11925 Proteus mirabilis HI4320 - DksA/TraR family C4-type zinc finger protein

Distribution of group_2227 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2227 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2227

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2227.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 DksA/TraR family C4-type zinc finger protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1734 7 K Transcription (K) RNA polymerase-binding transcription factor DksA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06204 7 RNA polymerase-binding transcription factor Biofilm formation - Escherichia coli -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01258 7 Prokaryotic dksA/traR C4-type zinc finger

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Protein TraR 1
Uncharacterized 8.5 kDa protein in gpA 5'region 1
Uncharacterized protein YbiI 1

Protein length

Unique protein length 88

Protein length distribution