Orthogroup:group_2224


Homologs in group_2224

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17010 FBDBKF_17010 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_16580 EHELCC_16580 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_16790 NLDBIP_16790 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_16680 LHKJJB_16680 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_17645 HKOGLL_17645 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS18470 F4V73_RS18470 Morganella psychrotolerans - XRE family transcriptional regulator
PMI_RS17505 PMI_RS17505 Proteus mirabilis HI4320 - XRE family transcriptional regulator

Distribution of group_2224 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2224 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2224

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2224.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 2

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 XRE family transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 7 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K23779 7 XRE family transcriptional regulator, regulator of sulfur utilization - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 7 Helix-turn-helix
PF07883 1 Cupin domain

Annotations of the 17 SwissProt hits

Annotation Number of occurrences
Control protein C.BamHI 1
HTH-type transcriptional regulator DdrOC 1
HTH-type transcriptional regulator DdrOP3 1
HTH-type transcriptional regulator SinR 2
HTH-type transcriptional regulator SlrR 1
HTH-type transcriptional regulator SutR 1
HTH-type transcriptional repressor RghR 1
Immunity repressor protein 1
Repressor protein C 1
Uncharacterized HTH-type transcriptional regulator MT0026 1
Uncharacterized HTH-type transcriptional regulator Mb0023 1
Uncharacterized HTH-type transcriptional regulator RghRB 1
Uncharacterized HTH-type transcriptional regulator Rv0023 1
Uncharacterized HTH-type transcriptional regulator YozG 1
Uncharacterized HTH-type transcriptional regulator y4dJ 1
Uncharacterized transcriptional regulator in ATPase CF(0) region 1

Protein length

Min length 185
Max length 192
Mean length (sd) 186.0 (2.6)
Median length 185.0

Protein length distribution