Homologs in group_2224

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16505 FBDBKF_16505 45.6 Morganella morganii S1 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
EHELCC_08370 EHELCC_08370 45.6 Morganella morganii S2 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
NLDBIP_08695 NLDBIP_08695 45.6 Morganella morganii S4 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
LHKJJB_05570 LHKJJB_05570 45.6 Morganella morganii S3 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
HKOGLL_05345 HKOGLL_05345 45.6 Morganella morganii S5 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
F4V73_RS03025 F4V73_RS03025 46.3 Morganella psychrotolerans - DoxX family protein

Distribution of the homologs in the orthogroup group_2224

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2224

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P54720 0.000168 42 32 1 84 2 catD Putative oxidoreductase CatD Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18425
Feature type CDS
Gene -
Product DoxX family protein
Location 4042625 - 4043041 (strand: 1)
Length 417 (nucleotides) / 138 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2224
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07681 DoxX

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2259 Function unknown (S) S Uncharacterized membrane protein YphA, DoxX/SURF4 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15977 putative oxidoreductase - -

Protein Sequence

MINKFNQLTNHPDLGKFVLRVSLGVLMLLHGLHKMEPGGLAGIQGMLANINLPAFIAYGTLLGEVLCPILLIIGLFTRFSAFVVAATMGVAVLMVHSGDLLALDPKTGGWAPESAGFYMFAAIAVMFLGSGRWALKKD

Flanking regions ( +/- flanking 50bp)

CATTAATACGTATTAAAAATGCCCATCACATTGTTGATTTTGGAGACGTTATGATTAATAAATTTAATCAGCTTACAAACCACCCCGATTTAGGTAAGTTTGTTTTACGTGTTTCGCTAGGTGTCTTAATGTTATTACACGGATTACACAAAATGGAGCCAGGAGGACTTGCCGGTATACAGGGAATGTTGGCAAATATTAACTTACCTGCATTTATTGCTTATGGCACATTACTGGGTGAAGTTCTATGTCCTATCTTACTGATTATCGGTTTATTTACTCGATTTTCAGCATTTGTTGTGGCGGCAACCATGGGGGTTGCGGTGCTGATGGTACATTCCGGTGATCTTTTAGCCTTAGATCCCAAAACGGGGGGATGGGCACCTGAAAGTGCTGGCTTCTATATGTTTGCTGCGATTGCGGTGATGTTTTTGGGTAGTGGTCGTTGGGCGCTCAAAAAAGATTAATAAATTTAATAGACAATAATATTGAATGAAACATTGCTAAGTTATTCAGG