Orthogroup:group_2222


Homologs in group_2222

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16985 FBDBKF_16985 Morganella morganii S1 rhaT carboxylate/amino acid/amine transporter
EHELCC_16605 EHELCC_16605 Morganella morganii S2 rhaT carboxylate/amino acid/amine transporter
NLDBIP_16815 NLDBIP_16815 Morganella morganii S4 rhaT carboxylate/amino acid/amine transporter
LHKJJB_16655 LHKJJB_16655 Morganella morganii S3 rhaT carboxylate/amino acid/amine transporter
HKOGLL_17620 HKOGLL_17620 Morganella morganii S5 rhaT carboxylate/amino acid/amine transporter
F4V73_RS18445 F4V73_RS18445 Morganella psychrotolerans - carboxylate/amino acid/amine transporter
PMI_RS17530 PMI_RS17530 Proteus mirabilis HI4320 - carboxylate/amino acid/amine transporter

Distribution of group_2222 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2222 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2222

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2222.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhaT 5
2 - 2

Product

# Product Occurence
1 carboxylate/amino acid/amine transporter 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0697 7 GER Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 Permease of the drug/metabolite transporter (DMT) superfamily

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 7 EamA-like transporter family

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Biotin transporter 4
Probable biotin transporter 1

Protein length

Min length 290
Max length 299
Mean length (sd) 297.7 (3.4)
Median length 299.0

Protein length distribution