Orthogroup:group_220


Homologs in group_220

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00235 FBDBKF_00235 Morganella morganii S1 - DNA replication protein
EHELCC_01310 EHELCC_01310 Morganella morganii S2 - DNA replication protein
NLDBIP_02150 NLDBIP_02150 Morganella morganii S4 - DNA replication protein
LHKJJB_03665 LHKJJB_03665 Morganella morganii S3 - DNA replication protein
HKOGLL_03380 HKOGLL_03380 Morganella morganii S5 - DNA replication protein
F4V73_RS06230 F4V73_RS06230 Morganella psychrotolerans - replication protein
PMI_RS04460 PMI_RS04460 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS04670 PMI_RS04670 Proteus mirabilis HI4320 - conserved phage C-terminal domain-containing protein

Distribution of group_220 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_220 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_220

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_220.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 8

Product

# Product Occurence
1 DNA replication protein 5
2 replication protein 1
3 hypothetical protein 1
4 conserved phage C-terminal domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0664 1 T Signal transduction mechanisms (T) cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04492 1 Bacteriophage replication protein O
PF09524 1 Conserved phage C-terminus (Phg_2220_C)

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
DNA replication protein gp18 1
Protein YfdO 1
Replication protein 15 1
Replication protein O 1
Uncharacterized protein YfdO 1

Protein length

Min length 298
Max length 363
Mean length (sd) 324.8 (22.7)
Median length 316.0

Protein length distribution