Orthogroup:group_2188


Homologs in group_2188

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16490 FBDBKF_16490 Morganella morganii S1 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
EHELCC_08355 EHELCC_08355 Morganella morganii S2 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
NLDBIP_08680 NLDBIP_08680 Morganella morganii S4 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
LHKJJB_05585 LHKJJB_05585 Morganella morganii S3 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
HKOGLL_05330 HKOGLL_05330 Morganella morganii S5 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
F4V73_RS03005 F4V73_RS03005 Morganella psychrotolerans - MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit
PMI_RS07730 PMI_RS07730 Proteus mirabilis HI4320 - MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit

Distribution of group_2188 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2188 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2188

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2188.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrA 5
2 - 2

Product

# Product Occurence
1 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0845 7 MV Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 Multidrug efflux pump subunit AcrA (membrane-fusion protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07799 7 membrane fusion protein, multidrug efflux system Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13437 1 HlyD family secretion protein
PF13533 1 Biotin-lipoyl like
PF16576 6 Barrel-sandwich domain of CusB or HlyD membrane-fusion

Annotations of the 166 SwissProt hits

Annotation Number of occurrences
Antibiotic efflux pump periplasmic linker protein ArpA 1
Efflux pump periplasmic linker BepD 1
Efflux pump periplasmic linker BepF 1
Macrolide export protein MacA 4
Membrane fusion protein MtrC 1
Multidrug efflux pump subunit AcrA 2
Multidrug export protein AcrE 1
Multidrug export protein EmrA 2
Multidrug resistance protein MdtA 44
Multidrug resistance protein MdtE 3
Multidrug resistance protein MdtN 4
Multidrug resistance protein MexA 1
Multidrug/solvent efflux pump periplasmic linker protein MepA 1
Nickel-cobalt-cadmium resistance protein NccB 1
Nodulation protein NolF 1
Probable efflux pump periplasmic linker TtgA 1
Probable efflux pump periplasmic linker protein SepA 1
Probable multidrug resistance protein EmrK 1
Putative multidrug resistance protein MdtA 1
Pyoverdine export membrane fusion protein PvdR 2
Solvent efflux pump periplasmic linker SrpA 1
Toluene efflux pump periplasmic linker protein TtgA 1
Toluene efflux pump periplasmic linker protein TtgD 1
Toluene efflux pump periplasmic linker protein TtgG 1
UPF0194 membrane protein CKO_02332 1
UPF0194 membrane protein YE2891 1
UPF0194 membrane protein YPA_1093 1
UPF0194 membrane protein YPK_2900 1
UPF0194 membrane protein YPN_2816 1
UPF0194 membrane protein YPTB1212 1
UPF0194 membrane protein YPTS_1292 1
UPF0194 membrane protein YP_0975 1
UPF0194 membrane protein YbhG 17
UPF0194 membrane protein YpsIP31758_2812 1
UPF0194 membrane protein in asrC 5'region (Fragment) 1
Uncharacterized protein HI_0894 1
Uncharacterized protein YdhJ 1
p-hydroxybenzoic acid efflux pump subunit AaeA 59

Protein length

Min length 405
Max length 411
Mean length (sd) 406.4 (2.5)
Median length 405.0

Protein length distribution