Orthogroup:group_2172


Homologs in group_2172

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16340 FBDBKF_16340 Morganella morganii S1 secB protein-export chaperone SecB
EHELCC_16375 EHELCC_16375 Morganella morganii S2 secB protein-export chaperone SecB
NLDBIP_16965 NLDBIP_16965 Morganella morganii S4 secB protein-export chaperone SecB
LHKJJB_16885 LHKJJB_16885 Morganella morganii S3 secB protein-export chaperone SecB
HKOGLL_16955 HKOGLL_16955 Morganella morganii S5 secB protein-export chaperone SecB
F4V73_RS17240 F4V73_RS17240 Morganella psychrotolerans secB protein-export chaperone SecB
PMI_RS15740 PMI_RS15740 Proteus mirabilis HI4320 secB protein-export chaperone SecB

Distribution of group_2172 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2172 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2172

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2172.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 secB 7

Product

# Product Occurence
1 protein-export chaperone SecB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1952 7 U Intracellular trafficking, secretion, and vesicular transport (U) Preprotein translocase subunit SecB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03071 7 preprotein translocase subunit SecB Quorum sensing
Protein export
Bacterial secretion system		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02556 7 Preprotein translocase subunit SecB

Annotations of the 367 SwissProt hits

Annotation Number of occurrences
Protein-export protein SecB 349
Protein-export protein SecB 1 9
Protein-export protein SecB 2 9

Protein length

Min length 157
Max length 159
Mean length (sd) 157.3 (0.8)
Median length 157.0

Protein length distribution