COG0563


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0563, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Adenylate kinase or related kinase
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0563 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2135 FBDBKF_16025 59275 59919 1 adk adenylate kinase Morganella morganii S1
1 group_2135 EHELCC_18630 16709 17353 1 adk adenylate kinase Morganella morganii S2
2 group_2135 NLDBIP_17460 46714 47358 1 adk adenylate kinase Morganella morganii S4
3 group_2135 LHKJJB_17200 8830 9474 -1 adk adenylate kinase Morganella morganii S3
4 group_2135 HKOGLL_17195 46714 47358 1 adk adenylate kinase Morganella morganii S5
5 group_2135 F4V73_RS16285 70314 70958 -1 adk adenylate kinase Morganella psychrotolerans
6 group_2135 PMI_RS10765 2369798 2370442 -1 adk adenylate kinase Proteus mirabilis HI4320