Orthogroup:group_2169



Homologs in group_2169

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16310 FBDBKF_16310 Morganella morganii S1 rfaF ADP-heptose--LPS heptosyltransferase RfaF
EHELCC_16345 EHELCC_16345 Morganella morganii S2 rfaF ADP-heptose--LPS heptosyltransferase RfaF
NLDBIP_16995 NLDBIP_16995 Morganella morganii S4 rfaF ADP-heptose--LPS heptosyltransferase RfaF
LHKJJB_16915 LHKJJB_16915 Morganella morganii S3 rfaF ADP-heptose--LPS heptosyltransferase RfaF
HKOGLL_16925 HKOGLL_16925 Morganella morganii S5 rfaF ADP-heptose--LPS heptosyltransferase RfaF
F4V73_RS17280 F4V73_RS17280 Morganella psychrotolerans rfaF ADP-heptose--LPS heptosyltransferase RfaF
PMI_RS15700 PMI_RS15700 Proteus mirabilis HI4320 rfaF ADP-heptose--LPS heptosyltransferase RfaF

Distribution of group_2169 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2169 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2169

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2169.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rfaF 7

Product

# Product Occurence
1 ADP-heptose--LPS heptosyltransferase RfaF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0859 7 M Cell wall/membrane/envelope biogenesis (M) ADP-heptose:LPS heptosyltransferase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02843 7 lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] Lipopolysaccharide biosynthesis
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01075 7 Glycosyltransferase family 9 (heptosyltransferase)

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013400 1 ADP-heptose-LPS heptosyltransferase II VF0044 Immune modulation
VFG013401 6 ADP-heptose-LPS heptosyltransferase II VF0044 Immune modulation

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Lipooligosaccharide heptosyltransferase 2 4
Lipopolysaccharide core heptosyltransferase OpsX 1
Lipopolysaccharide heptosyltransferase 1 5
Lipopolysaccharide heptosyltransferase 2 2
Lipopolysaccharide heptosyltransferase 3 2
Putative glycosyltransferase HI_0523 1

Protein length

Min length 350
Max length 353
Mean length (sd) 352.6 (1.1)
Median length 353.0

Protein length distribution