Orthogroup:group_2161



Homologs in group_2161

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16265 FBDBKF_16265 Morganella morganii S1 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
EHELCC_16300 EHELCC_16300 Morganella morganii S2 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
NLDBIP_17040 NLDBIP_17040 Morganella morganii S4 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
LHKJJB_16960 LHKJJB_16960 Morganella morganii S3 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
HKOGLL_16880 HKOGLL_16880 Morganella morganii S5 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
F4V73_RS17325 F4V73_RS17325 Morganella psychrotolerans mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
PMI_RS15645 PMI_RS15645 Proteus mirabilis HI4320 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase

Distribution of group_2161 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2161 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2161

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2161.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mutM 7

Product

# Product Occurence
1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0266 7 L Replication, recombination and repair (L) Formamidopyrimidine-DNA glycosylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10563 7 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Base excision repair -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01149 7 Formamidopyrimidine-DNA glycosylase N-terminal domain
PF06827 7 Zinc finger found in FPG and IleRS
PF06831 7 Formamidopyrimidine-DNA glycosylase H2TH domain

Annotations of the 509 SwissProt hits

Annotation Number of occurrences
Endonuclease 8 46
Endonuclease 8 1 3
Endonuclease 8 2 3
Endonuclease 8-like 3 2
Formamidopyrimidine-DNA glycosylase 450
Formamidopyrimidine-DNA glycosylase 1 2
Probable endonuclease 8 2 1
Probable formamidopyrimidine-DNA glycosylase 1
Uncharacterized formamidopyrimidine-DNA glycosylase-like protein 1

Protein length

Min length 269
Max length 274
Mean length (sd) 269.7 (1.9)
Median length 269.0

Protein length distribution