COG0544


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0544, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0544 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2110 FBDBKF_15865 23082 24392 1 tig trigger factor Morganella morganii S1
1 group_2110 EHELCC_18465 10521 11831 1 tig trigger factor Morganella morganii S2
2 group_2110 NLDBIP_17300 10521 11831 1 tig trigger factor Morganella morganii S4
3 group_2110 LHKJJB_17360 44357 45667 -1 tig trigger factor Morganella morganii S3
4 group_2110 HKOGLL_17035 10521 11831 1 tig trigger factor Morganella morganii S5
5 group_2110 F4V73_RS16445 107238 108548 -1 tig trigger factor Morganella psychrotolerans
6 group_2110 PMI_RS00550 141442 142746 1 tig trigger factor Proteus mirabilis HI4320