Orthogroup:group_2140


Homologs in group_2140

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16085 FBDBKF_16085 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
EHELCC_16120 EHELCC_16120 Morganella morganii S2 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_17220 NLDBIP_17220 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_17140 LHKJJB_17140 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_16700 HKOGLL_16700 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
F4V73_RS17530 F4V73_RS17530 Morganella psychrotolerans - energy transducer TonB
PMI_RS15450 PMI_RS15450 Proteus mirabilis HI4320 - energy transducer TonB

Distribution of group_2140 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2140 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2140

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2140.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tonB 5
2 - 2

Product

# Product Occurence
1 Periplasmic protein TonB, links inner and outer membranes 5
2 energy transducer TonB 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0810 7 M Cell wall/membrane/envelope biogenesis (M) Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03832 7 periplasmic protein TonB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03544 7 Gram-negative bacterial TonB protein C-terminal

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Protein TonB 6

Protein length

Min length 265
Max length 267
Mean length (sd) 265.6 (1.0)
Median length 265.0

Protein length distribution