Orthogroup:group_2119


Homologs in group_2119

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15920 FBDBKF_15920 Morganella morganii S1 lrp DNA-binding transcriptional regulator, Lrp family
EHELCC_18520 EHELCC_18520 Morganella morganii S2 lrp DNA-binding transcriptional regulator, Lrp family
NLDBIP_17355 NLDBIP_17355 Morganella morganii S4 lrp DNA-binding transcriptional regulator, Lrp family
LHKJJB_17305 LHKJJB_17305 Morganella morganii S3 lrp DNA-binding transcriptional regulator, Lrp family
HKOGLL_17090 HKOGLL_17090 Morganella morganii S5 lrp DNA-binding transcriptional regulator, Lrp family
F4V73_RS16390 F4V73_RS16390 Morganella psychrotolerans - Lrp/AsnC family transcriptional regulator
PMI_RS00595 PMI_RS00595 Proteus mirabilis HI4320 - Lrp/AsnC family transcriptional regulator

Distribution of group_2119 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2119 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2119

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2119.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lrp 5
2 - 2

Product

# Product Occurence
1 DNA-binding transcriptional regulator, Lrp family 5
2 Lrp/AsnC family transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1522 7 K Transcription (K) DNA-binding transcriptional regulator, Lrp family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05800 7 Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01037 7 Lrp/AsnC ligand binding domain
PF13412 7 Winged helix-turn-helix DNA-binding

Annotations of the 58 SwissProt hits

Annotation Number of occurrences
Bkd operon transcriptional regulator 2
DNA-binding transcriptional activator DecR 3
Glutamate uptake regulatory protein 2
HTH-type transcriptional regulator FL11 3
HTH-type transcriptional regulator Lrp 1
HTH-type transcriptional regulator LrpA 4
HTH-type transcriptional regulator LrpA1 1
HTH-type transcriptional regulator LrpB 1
HTH-type transcriptional regulator LrpC 1
HTH-type transcriptional regulator Ptr1 1
HTH-type transcriptional regulator Ptr2 1
HTH-type transcriptional regulator Zrp 2
Leucine-responsive regulatory protein 10
Proline dehydrogenase transcriptional activator 2
Regulatory protein AsnC 1
Siroheme decarboxylase alpha subunit 1
Transcriptional regulator AzlB 1
Transcriptional regulatory protein DoeX 1
Uncharacterized HTH-type transcriptional regulator HI_0224 1
Uncharacterized HTH-type transcriptional regulator PF0054 1
Uncharacterized HTH-type transcriptional regulator PF0250 1
Uncharacterized HTH-type transcriptional regulator PF0864 1
Uncharacterized HTH-type transcriptional regulator PF1231 1
Uncharacterized HTH-type transcriptional regulator PF1734 1
Uncharacterized HTH-type transcriptional regulator PH0045 1
Uncharacterized HTH-type transcriptional regulator PH0061 1
Uncharacterized HTH-type transcriptional regulator PH0140 1
Uncharacterized HTH-type transcriptional regulator PH1692 1
Uncharacterized HTH-type transcriptional regulator PH1916 1
Uncharacterized HTH-type transcriptional regulator PYRAB00550 1
Uncharacterized HTH-type transcriptional regulator PYRAB00690 1
Uncharacterized HTH-type transcriptional regulator PYRAB01370 1
Uncharacterized HTH-type transcriptional regulator PYRAB04820 1
Uncharacterized HTH-type transcriptional regulator PYRAB16920 1
Uncharacterized HTH-type transcriptional regulator YezC 1
Uncharacterized HTH-type transcriptional regulator YwrC 1
Uncharacterized HTH-type transcriptional regulator y4sM 1
Uncharacterized HTH-type transcriptional regulator y4tD 1

Protein length

Min length 153
Max length 171
Mean length (sd) 166.6 (7.7)
Median length 171.0

Protein length distribution