Orthogroup:group_2100


Homologs in group_2100

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15440 FBDBKF_15440 Morganella morganii S1 asnC transcriptional regulator AsnC
EHELCC_15800 EHELCC_15800 Morganella morganii S2 asnC transcriptional regulator AsnC
NLDBIP_16570 NLDBIP_16570 Morganella morganii S4 asnC transcriptional regulator AsnC
LHKJJB_16235 LHKJJB_16235 Morganella morganii S3 asnC transcriptional regulator AsnC
HKOGLL_16005 HKOGLL_16005 Morganella morganii S5 asnC transcriptional regulator AsnC
F4V73_RS17705 F4V73_RS17705 Morganella psychrotolerans asnC transcriptional regulator AsnC
PMI_RS15120 PMI_RS15120 Proteus mirabilis HI4320 asnC transcriptional regulator AsnC

Distribution of group_2100 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2100 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2100

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2100.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 asnC 7

Product

# Product Occurence
1 transcriptional regulator AsnC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1522 7 K Transcription (K) DNA-binding transcriptional regulator, Lrp family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03718 7 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01037 7 Lrp/AsnC ligand binding domain
PF13404 7 AsnC-type helix-turn-helix domain

Annotations of the 56 SwissProt hits

Annotation Number of occurrences
Bkd operon transcriptional regulator 1
Glutamate uptake regulatory protein 2
HTH-type transcriptional regulator FL11 3
HTH-type transcriptional regulator Lrp 1
HTH-type transcriptional regulator LrpA 4
HTH-type transcriptional regulator LrpA1 1
HTH-type transcriptional regulator LrpB 1
HTH-type transcriptional regulator LrpC 1
HTH-type transcriptional regulator LysM 2
HTH-type transcriptional regulator Ptr1 1
HTH-type transcriptional regulator Ptr2 1
HTH-type transcriptional regulator Zrp 2
Leucine-responsive regulatory protein 10
Proline dehydrogenase transcriptional activator 1
Regulatory protein AsnC 5
Transcriptional regulator AzlB 1
Uncharacterized HTH-type transcriptional regulator HI_0224 1
Uncharacterized HTH-type transcriptional regulator PF0054 1
Uncharacterized HTH-type transcriptional regulator PF0250 1
Uncharacterized HTH-type transcriptional regulator PF0864 1
Uncharacterized HTH-type transcriptional regulator PF1231 1
Uncharacterized HTH-type transcriptional regulator PF1734 1
Uncharacterized HTH-type transcriptional regulator PH0045 1
Uncharacterized HTH-type transcriptional regulator PH0061 1
Uncharacterized HTH-type transcriptional regulator PH0140 1
Uncharacterized HTH-type transcriptional regulator PH1692 1
Uncharacterized HTH-type transcriptional regulator PH1916 1
Uncharacterized HTH-type transcriptional regulator PYRAB00550 1
Uncharacterized HTH-type transcriptional regulator PYRAB00690 1
Uncharacterized HTH-type transcriptional regulator PYRAB01370 1
Uncharacterized HTH-type transcriptional regulator PYRAB04820 1
Uncharacterized HTH-type transcriptional regulator PYRAB16920 1
Uncharacterized HTH-type transcriptional regulator YezC 1
Uncharacterized HTH-type transcriptional regulator YwrC 1
Uncharacterized HTH-type transcriptional regulator y4tD 1

Protein length

Unique protein length 153

Protein length distribution