Homologs in group_2061

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15440 FBDBKF_15440 95.4 Morganella morganii S1 asnC transcriptional regulator AsnC
EHELCC_15800 EHELCC_15800 95.4 Morganella morganii S2 asnC transcriptional regulator AsnC
NLDBIP_16570 NLDBIP_16570 95.4 Morganella morganii S4 asnC transcriptional regulator AsnC
LHKJJB_16235 LHKJJB_16235 95.4 Morganella morganii S3 asnC transcriptional regulator AsnC
HKOGLL_16005 HKOGLL_16005 95.4 Morganella morganii S5 asnC transcriptional regulator AsnC
PMI_RS15120 PMI_RS15120 91.5 Proteus mirabilis HI4320 asnC transcriptional regulator AsnC

Distribution of the homologs in the orthogroup group_2061

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2061

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACI9 2.88e-85 249 78 0 151 3 asnC Regulatory protein AsnC Shigella flexneri
P0ACI6 2.88e-85 249 78 0 151 1 asnC Regulatory protein AsnC Escherichia coli (strain K12)
P0ACI7 2.88e-85 249 78 0 151 3 asnC Regulatory protein AsnC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACI8 2.88e-85 249 78 0 151 3 asnC Regulatory protein AsnC Escherichia coli O157:H7
P44337 4.55e-68 206 66 0 150 3 asnC Regulatory protein AsnC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57615 8.23e-24 93 36 1 138 1 ptr1 HTH-type transcriptional regulator Ptr1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8U0P3 2.81e-20 84 31 2 138 3 fl11 HTH-type transcriptional regulator FL11 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9V0Y9 3.26e-19 81 33 2 139 3 fl11 HTH-type transcriptional regulator FL11 Pyrococcus abyssi (strain GE5 / Orsay)
O59188 1.65e-18 79 32 2 138 1 fl11 HTH-type transcriptional regulator FL11 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O59256 1.88e-18 79 34 1 126 3 lrpA HTH-type transcriptional regulator LrpA Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q8U067 3.42e-17 76 30 3 143 4 PF1734 Uncharacterized HTH-type transcriptional regulator PF1734 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9V159 3.71e-17 76 33 1 128 3 lrpA HTH-type transcriptional regulator LrpA Pyrococcus abyssi (strain GE5 / Orsay)
P42180 7.69e-17 75 34 1 126 1 lrpA HTH-type transcriptional regulator LrpA Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q8U1H7 8.5e-17 75 34 1 135 4 PF1231 Uncharacterized HTH-type transcriptional regulator PF1231 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9V2D7 2.97e-16 74 31 1 136 4 PYRAB01370 Uncharacterized HTH-type transcriptional regulator PYRAB01370 Pyrococcus abyssi (strain GE5 / Orsay)
O59309 6.4e-16 73 31 2 139 4 PH1692 Uncharacterized HTH-type transcriptional regulator PH1692 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9V1E5 7.58e-16 72 30 2 138 4 PYRAB04820 Uncharacterized HTH-type transcriptional regulator PYRAB04820 Pyrococcus abyssi (strain GE5 / Orsay)
O57880 1.74e-15 72 30 1 136 1 PH0140 Uncharacterized HTH-type transcriptional regulator PH0140 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q52710 2.34e-15 71 28 2 142 4 putR Proline dehydrogenase transcriptional activator Rhodobacter capsulatus
O59579 3.94e-13 65 29 3 149 4 PH1916 Uncharacterized HTH-type transcriptional regulator PH1916 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
P56901 5.22e-13 65 23 1 141 3 lrp Leucine-responsive regulatory protein Rhizobium meliloti (strain 1021)
Q9UY16 1.12e-12 64 29 3 149 4 PYRAB16920 Uncharacterized HTH-type transcriptional regulator PYRAB16920 Pyrococcus abyssi (strain GE5 / Orsay)
Q58133 1.72e-12 63 27 1 129 1 ptr2 HTH-type transcriptional regulator Ptr2 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8U4M7 4.01e-12 63 34 2 122 4 PF0054 Uncharacterized HTH-type transcriptional regulator PF0054 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q8U445 1.55e-11 61 27 2 143 4 PF0250 Uncharacterized HTH-type transcriptional regulator PF0250 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
P42179 1.66e-11 62 29 3 143 4 bkdR Bkd operon transcriptional regulator Pseudomonas putida
O57818 9.99e-11 59 29 1 120 4 PH0045 Uncharacterized HTH-type transcriptional regulator PH0045 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q980W9 1.68e-10 58 32 4 145 1 lysM HTH-type transcriptional regulator LysM Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Q976J7 2.41e-10 58 30 3 142 3 lysM HTH-type transcriptional regulator LysM Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
P96582 2.44e-10 58 27 2 122 1 lrpC HTH-type transcriptional regulator LrpC Bacillus subtilis (strain 168)
O31497 5.3e-10 57 33 1 118 4 yezC Uncharacterized HTH-type transcriptional regulator YezC Bacillus subtilis (strain 168)
B0R4X4 1.34e-09 56 27 1 121 1 lrpA1 HTH-type transcriptional regulator LrpA1 Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
P0ACJ3 1.62e-09 56 24 2 140 3 lrp Leucine-responsive regulatory protein Shigella flexneri
P37425 1.62e-09 56 24 2 140 3 lrp Leucine-responsive regulatory protein Serratia marcescens
P0ACJ4 1.62e-09 56 24 2 140 3 lrp Leucine-responsive regulatory protein Klebsiella aerogenes
P0ACJ0 1.62e-09 56 24 2 140 1 lrp Leucine-responsive regulatory protein Escherichia coli (strain K12)
P0ACJ1 1.62e-09 56 24 2 140 3 lrp Leucine-responsive regulatory protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACJ2 1.62e-09 56 24 2 140 3 lrp Leucine-responsive regulatory protein Escherichia coli O157:H7
P44580 3.12e-09 55 30 1 115 4 HI_0224 Uncharacterized HTH-type transcriptional regulator HI_0224 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37424 4.47e-09 55 23 2 140 3 lrp Leucine-responsive regulatory protein Klebsiella pneumoniae
O07920 5.12e-09 55 27 1 137 4 azlB Transcriptional regulator AzlB Bacillus subtilis (strain 168)
P0A2S0 7.82e-09 54 23 2 140 3 lrp Leucine-responsive regulatory protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
F8DT24 1.79e-08 53 30 3 126 4 zrp HTH-type transcriptional regulator Zrp Zymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)
Q9V2M0 4.06e-08 52 25 1 120 4 PYRAB00550 Uncharacterized HTH-type transcriptional regulator PYRAB00550 Pyrococcus abyssi (strain GE5 / Orsay)
P0DJA6 4.83e-08 52 29 3 126 4 zrp HTH-type transcriptional regulator Zrp Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Q8U2H1 2.26e-05 45 39 1 53 1 PF0864 Uncharacterized HTH-type transcriptional regulator PF0864 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9V2K6 6.77e-05 43 21 2 137 4 PYRAB00690 Uncharacterized HTH-type transcriptional regulator PYRAB00690 Pyrococcus abyssi (strain GE5 / Orsay)
P45265 7.27e-05 43 21 2 142 3 lrp Leucine-responsive regulatory protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55658 0.000104 43 26 2 119 4 NGR_a01550 Uncharacterized HTH-type transcriptional regulator y4tD Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P96652 0.000115 43 29 0 78 4 lrpA HTH-type transcriptional regulator LrpA Bacillus subtilis (strain 168)
O57802 0.000132 43 23 2 137 1 PH0061 Uncharacterized HTH-type transcriptional regulator PH0061 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
F8DT92 0.000397 42 24 3 152 4 grp Glutamate uptake regulatory protein Zymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)
P0DJA5 0.000439 42 24 3 152 3 grp Glutamate uptake regulatory protein Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
B0R717 0.000727 41 24 1 102 4 lrp HTH-type transcriptional regulator Lrp Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17705
Feature type CDS
Gene asnC
Product transcriptional regulator AsnC
Location 182400 - 182861 (strand: -1)
Length 462 (nucleotides) / 153 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2061
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01037 Lrp/AsnC ligand binding domain
PF13404 AsnC-type helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1522 Transcription (K) K DNA-binding transcriptional regulator, Lrp family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA - -

Protein Sequence

MTEIYQIDNLDRDILHALMANARTPYAELAKKFAVSPGTIHVRVEKMKQAGIITGTRVDISAKHLGFDVTCFIGIILKSAKDYPTALTKLDKLEEVVEVYYTTGQYSIFIKVMCKTIESLQDVLINKIQSIDEIQSTETLISLQNPIIRTIHP

Flanking regions ( +/- flanking 50bp)

TCATTTTAATGGTGCTTAAAATGAATTTTCGCTAATTTAGAGGGCTTAAAATGACCGAAATTTATCAGATCGATAATCTGGACCGTGACATACTTCACGCTTTAATGGCAAATGCCCGCACACCTTATGCAGAATTAGCTAAAAAATTCGCCGTCAGTCCGGGAACCATTCATGTCCGCGTCGAAAAAATGAAGCAGGCTGGTATCATCACCGGAACCCGGGTAGATATAAGTGCAAAGCACCTGGGCTTTGATGTGACCTGTTTTATCGGCATCATCCTGAAAAGTGCCAAAGACTATCCCACCGCTCTGACAAAACTCGATAAGCTTGAAGAAGTGGTTGAAGTCTATTACACCACCGGACAGTACAGTATTTTTATTAAAGTGATGTGTAAAACGATCGAGTCACTTCAGGATGTACTTATCAACAAGATCCAGAGTATTGATGAAATACAGTCCACCGAAACACTTATCTCCTTACAAAACCCGATCATACGAACGATCCATCCGTAAGAAAAAAATGTTATAACCACAATATCCACAGGTAGATCCCAGCTGTTTCA