Orthogroup:group_2095


Homologs in group_2095

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15765 FBDBKF_15765 Morganella morganii S1 uvrC excinuclease ABC subunit UvrC
EHELCC_17680 EHELCC_17680 Morganella morganii S2 uvrC excinuclease ABC subunit UvrC
NLDBIP_19350 NLDBIP_19350 Morganella morganii S4 uvrC excinuclease ABC subunit UvrC
LHKJJB_18120 LHKJJB_18120 Morganella morganii S3 uvrC excinuclease ABC subunit UvrC
HKOGLL_18960 HKOGLL_18960 Morganella morganii S5 uvrC excinuclease ABC subunit UvrC
F4V73_RS07925 F4V73_RS07925 Morganella psychrotolerans uvrC excinuclease ABC subunit UvrC
PMI_RS07400 PMI_RS07400 Proteus mirabilis HI4320 uvrC excinuclease ABC subunit UvrC

Distribution of group_2095 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2095 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2095

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2095.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 uvrC 7

Product

# Product Occurence
1 excinuclease ABC subunit UvrC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0322 7 L Replication, recombination and repair (L) Excinuclease UvrABC, nuclease subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03703 7 excinuclease ABC subunit C Nucleotide excision repair -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01541 7 GIY-YIG catalytic domain
PF02151 7 UvrB/uvrC motif
PF08459 7 UvrC RNAse H endonuclease domain
PF14520 7 Helix-hairpin-helix domain
PF22920 7 UvrC Ribonuclease H-like domain

Annotations of the 510 SwissProt hits

Annotation Number of occurrences
UvrABC system protein C 510

Protein length

Min length 610
Max length 615
Mean length (sd) 614.3 (1.9)
Median length 615.0

Protein length distribution