Orthogroup:group_2082


Homologs in group_2082

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15580 FBDBKF_15580 Morganella morganii S1 dnaN DNA polymerase III subunit beta
EHELCC_15940 EHELCC_15940 Morganella morganii S2 dnaN DNA polymerase III subunit beta
NLDBIP_16430 NLDBIP_16430 Morganella morganii S4 dnaN DNA polymerase III subunit beta
LHKJJB_16375 LHKJJB_16375 Morganella morganii S3 dnaN DNA polymerase III subunit beta
HKOGLL_16145 HKOGLL_16145 Morganella morganii S5 dnaN DNA polymerase III subunit beta
F4V73_RS17580 F4V73_RS17580 Morganella psychrotolerans dnaN DNA polymerase III subunit beta
PMI_RS15505 PMI_RS15505 Proteus mirabilis HI4320 dnaN DNA polymerase III subunit beta

Distribution of group_2082 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2082 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2082

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2082.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dnaN 7

Product

# Product Occurence
1 DNA polymerase III subunit beta 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0592 7 L Replication, recombination and repair (L) DNA polymerase III sliding clamp (beta) subunit, PCNA homolog

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02338 7 DNA polymerase III subunit beta [EC:2.7.7.7] DNA replication
Mismatch repair
Homologous recombination		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00712 7 DNA polymerase III beta subunit, N-terminal domain
PF02767 7 DNA polymerase III beta subunit, central domain
PF02768 7 DNA polymerase III beta subunit, C-terminal domain

Annotations of the 63 SwissProt hits

Annotation Number of occurrences
Beta sliding clamp 58
Beta sliding clamp (Fragment) 4
Beta sliding clamp homolog GriR 1

Protein length

Min length 366
Max length 367
Mean length (sd) 366.1 (0.4)
Median length 366.0

Protein length distribution