Orthogroup:group_2080


Homologs in group_2080

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15570 FBDBKF_15570 Morganella morganii S1 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B
EHELCC_15930 EHELCC_15930 Morganella morganii S2 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B
NLDBIP_16440 NLDBIP_16440 Morganella morganii S4 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B
LHKJJB_16365 LHKJJB_16365 Morganella morganii S3 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B
HKOGLL_16135 HKOGLL_16135 Morganella morganii S5 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B
F4V73_RS17590 F4V73_RS17590 Morganella psychrotolerans gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B
PMI_RS15515 PMI_RS15515 Proteus mirabilis HI4320 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B

Distribution of group_2080 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2080 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2080

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2080.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gyrB 7

Product

# Product Occurence
1 DNA topoisomerase (ATP-hydrolyzing) subunit B 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0187 7 L Replication, recombination and repair (L) DNA gyrase/topoisomerase IV, subunit B

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02470 7 DNA gyrase subunit B [EC:5.6.2.2] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00204 7 DNA gyrase B
PF00986 7 DNA gyrase B subunit, carboxyl terminus
PF01751 7 Toprim domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF18053 7 DNA gyrase B subunit insert domain
PF21249 7 GyrB, hook

Annotations of the 178 SwissProt hits

Annotation Number of occurrences
Antibiotic resistant DNA gyrase subunit B 1
DNA gyrase subunit B 76
DNA gyrase subunit B (Fragment) 18
DNA gyrase subunit B (Fragments) 5
DNA gyrase subunit B, chloroplastic 1
DNA gyrase subunit B, chloroplastic/mitochondrial 2
DNA gyrase subunit B, mitochondrial 1
DNA gyrase subunit B, novobiocin-resistant 1
DNA gyrase subunit B, novobiocin-sensitive 1
DNA topoisomerase 2 23
DNA topoisomerase 2 top-2 1
DNA topoisomerase 2, mitochondrial 1
DNA topoisomerase 2-alpha 6
DNA topoisomerase 2-beta 4
DNA topoisomerase 4 subunit B 31
DNA topoisomerase large subunit 1
DNA topoisomerase-like protein cin-4 1
Probable DNA topoisomerase 2 1
Putative DNA topoisomerase 2, mitochondrial 1
Topoisomerase subunit TopoN 1
Type 2 topoisomerase subunit B 1

Protein length

Unique protein length 804

Protein length distribution