Orthogroup:group_2052



Homologs in group_2052

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15370 FBDBKF_15370 Morganella morganii S1 clpB ATP-dependent chaperone ClpB
EHELCC_10875 EHELCC_10875 Morganella morganii S2 clpB ATP-dependent chaperone ClpB
NLDBIP_11220 NLDBIP_11220 Morganella morganii S4 clpB ATP-dependent chaperone ClpB
LHKJJB_11080 LHKJJB_11080 Morganella morganii S3 clpB ATP-dependent chaperone ClpB
HKOGLL_09690 HKOGLL_09690 Morganella morganii S5 clpB ATP-dependent chaperone ClpB
F4V73_RS12085 F4V73_RS12085 Morganella psychrotolerans clpB ATP-dependent chaperone ClpB
PMI_RS01920 PMI_RS01920 Proteus mirabilis HI4320 clpB ATP-dependent chaperone ClpB

Distribution of group_2052 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2052 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2052

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2052.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 clpB 7

Product

# Product Occurence
1 ATP-dependent chaperone ClpB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0542 7 O Posttranslational modification, protein turnover, chaperones (O) ATP-dependent Clp protease, ATP-binding subunit ClpA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03695 7 ATP-dependent Clp protease ATP-binding subunit ClpB Longevity regulating pathway - multiple species -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00004 7 ATPase family associated with various cellular activities (AAA)
PF02861 7 Clp amino terminal domain, pathogenicity island component
PF07724 7 AAA domain (Cdc48 subfamily)
PF10431 7 C-terminal, D2-small domain, of ClpB protein
PF17871 7 AAA lid domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG049189 7 ATP-dependent chaperone ClpB VF0783 Effector delivery system

Annotations of the 310 SwissProt hits

Annotation Number of occurrences
AAA+ ATPase ClpV1 1
ATP-dependent Clp protease ATP-binding subunit ClpA 3
ATP-dependent Clp protease ATP-binding subunit ClpA homolog 5
ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic 1
ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic 1
ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Fragment) 1
ATP-dependent Clp protease ATP-binding subunit ClpC 13
ATP-dependent Clp protease ATP-binding subunit ClpC1 3
ATP-dependent Clp protease ATP-binding subunit ClpE 4
ATP-dependent Clp protease ATP-binding subunit ClpL 10
ATP-dependent Clp protease ATP-binding subunit ClpX 9
ATP-dependent protease ATP-binding subunit-like protein 1
ATP-dependent protease ATP-binding subunit-like protein AmiB 1
ATP-dependent protease ATPase subunit HslU 69
ATP-dependent protease ATPase subunit HslU1 1
Cell division protein C 1
Chaperone protein ClpB 123
Chaperone protein ClpB 1 6
Chaperone protein ClpB 2 6
Chaperone protein ClpB1 2
Chaperone protein ClpB2, chloroplastic 1
Chaperone protein ClpB3, chloroplastic 1
Chaperone protein ClpB3, mitochondrial 1
Chaperone protein ClpB4, mitochondrial 1
Chaperone protein ClpC, chloroplastic 1
Chaperone protein ClpC1, chloroplastic 2
Chaperone protein ClpC2, chloroplastic 2
Chaperone protein ClpC3, chloroplastic 1
Chaperone protein ClpC4, chloroplastic 1
Chaperone protein ClpD, chloroplastic 1
Chaperone protein ClpD1, chloroplastic 1
Chaperone protein ClpD2, chloroplastic 1
ClpA homolog protein 1
Heat shock protein 100 1
Heat shock protein 100 (Fragment) 1
Heat shock protein 104 2
Heat shock protein 78, mitochondrial 3
Heat shock protein hsp98 1
Hemolysin B 1
Lon protease 1
Lon protease 1 2
Mitochondrial disaggregase 4
Negative regulator of genetic competence ClpC/MecB 1
Probable ATP-dependent Clp protease ATP-binding subunit 6
Probable chaperone protein ClpB 1 1
Probable chaperone protein ClpB 2 1
Protein DWARF 53 1
Protein DWARF 53-LIKE 1
Protein SMAX1-LIKE 2 1
Protein SMAX1-LIKE 6 1
Protein SMAX1-LIKE 7 1
Protein SMAX1-LIKE 8 1
Protein SMAX1-like 1
Protein SUPPRESSOR OF MAX2 1 1
Putative chaperone protein ClpB2, chloroplastic 1

Protein length

Min length 857
Max length 858
Mean length (sd) 857.1 (0.4)
Median length 857.0

Protein length distribution