Orthogroup:group_2050



Homologs in group_2050

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15360 FBDBKF_15360 Morganella morganii S1 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
EHELCC_10885 EHELCC_10885 Morganella morganii S2 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
NLDBIP_11230 NLDBIP_11230 Morganella morganii S4 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
LHKJJB_11090 LHKJJB_11090 Morganella morganii S3 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
HKOGLL_09700 HKOGLL_09700 Morganella morganii S5 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
F4V73_RS12095 F4V73_RS12095 Morganella psychrotolerans rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
PMI_RS01910 PMI_RS01910 Proteus mirabilis HI4320 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD

Distribution of group_2050 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2050 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2050

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2050.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rluD 7

Product

# Product Occurence
1 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0564 7 J Translation, ribosomal structure and biogenesis (J) Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06180 7 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00849 7 RNA pseudouridylate synthase
PF01479 7 S4 domain

Annotations of the 135 SwissProt hits

Annotation Number of occurrences
21S rRNA pseudouridine(2819) synthase 3
Bifunctional protein RIB2 1
Dual-specificity RNA pseudouridine synthase RluA 13
MATH and LRR domain-containing protein PFE0570w 1
Pseudouridylate synthase C18B11.02c 1
Pseudouridylate synthase RPUSD2 2
Pseudouridylate synthase RPUSD4, mitochondrial 6
Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 1
RNA pseudouridine synthase 1 2
RNA pseudouridine synthase 2, chloroplastic 2
RNA pseudouridine synthase 3, mitochondrial 2
RNA pseudouridine synthase 4, mitochondrial 2
RNA pseudouridine synthase 5 2
RNA pseudouridine synthase 7 2
RNA pseudouridylate synthase domain-containing protein 1 4
Ribosomal large subunit pseudouridine synthase C 22
Ribosomal large subunit pseudouridine synthase D 28
Uncharacterized RNA pseudouridine synthase Caur_0901 1
Uncharacterized RNA pseudouridine synthase Cpar_0723 1
Uncharacterized RNA pseudouridine synthase HI_0042 1
Uncharacterized RNA pseudouridine synthase HP_0347 1
Uncharacterized RNA pseudouridine synthase HP_0745 1
Uncharacterized RNA pseudouridine synthase HP_0956 1
Uncharacterized RNA pseudouridine synthase MCAP_0714 1
Uncharacterized RNA pseudouridine synthase MG209 1
Uncharacterized RNA pseudouridine synthase MG209 homolog 1
Uncharacterized RNA pseudouridine synthase MG370 1
Uncharacterized RNA pseudouridine synthase MG370 homolog 1
Uncharacterized RNA pseudouridine synthase MT1592 1
Uncharacterized RNA pseudouridine synthase Mb1567 1
Uncharacterized RNA pseudouridine synthase Rv1540 1
Uncharacterized RNA pseudouridine synthase YhcT 1
Uncharacterized RNA pseudouridine synthase YjbO 1
Uncharacterized RNA pseudouridine synthase YlyB 1
Uncharacterized RNA pseudouridine synthase ZMO0505 1
Uncharacterized RNA pseudouridine synthase aq_1758 1
Uncharacterized RNA pseudouridine synthase jhp_0321 1
Uncharacterized RNA pseudouridine synthase jhp_0682 1
Uncharacterized RNA pseudouridine synthase jhp_0890 1
Uncharacterized RNA pseudouridine synthase slr1592 1
Uncharacterized RNA pseudouridine synthase slr1629 1
Uncharacterized protein K07E8.7 1
tRNA pseudouridine synthase C 14
tRNA pseudouridine(31) synthase 1
tRNA pseudouridine(32) synthase, mitochondrial 1

Protein length

Unique protein length 325

Protein length distribution