COG0279


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0279, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphoheptose isomerase
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG0279 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_709 FBDBKF_03075 14355 14945 1 diaA DnaA initiator-associating protein DiaA Morganella morganii S1
1 group_2011 FBDBKF_15115 34025 34603 1 lpcA D-sedoheptulose 7-phosphate isomerase Morganella morganii S1
2 group_709 EHELCC_07460 232158 232748 -1 diaA DnaA initiator-associating protein DiaA Morganella morganii S2
3 group_2011 EHELCC_11130 50303 50881 -1 lpcA D-sedoheptulose 7-phosphate isomerase Morganella morganii S2
4 group_709 NLDBIP_07785 232031 232621 -1 diaA DnaA initiator-associating protein DiaA Morganella morganii S4
5 group_2011 NLDBIP_11475 50303 50881 -1 lpcA D-sedoheptulose 7-phosphate isomerase Morganella morganii S4
6 group_709 LHKJJB_07320 195777 196367 -1 diaA DnaA initiator-associating protein DiaA Morganella morganii S3
7 group_2011 LHKJJB_11335 50303 50881 -1 lpcA D-sedoheptulose 7-phosphate isomerase Morganella morganii S3
8 group_709 HKOGLL_03610 37020 37610 1 diaA DnaA initiator-associating protein DiaA Morganella morganii S5
9 group_2011 HKOGLL_09945 50303 50881 -1 lpcA D-sedoheptulose 7-phosphate isomerase Morganella morganii S5
10 group_709 F4V73_RS11845 524215 524805 -1 diaA DnaA initiator-associating protein DiaA Morganella psychrotolerans
11 group_2011 F4V73_RS12335 50724 51302 -1 lpcA D-sedoheptulose 7-phosphate isomerase Morganella psychrotolerans
12 group_2011 PMI_RS01670 399281 399859 1 lpcA D-sedoheptulose 7-phosphate isomerase Proteus mirabilis HI4320
13 group_709 PMI_RS18360 4029597 4030187 -1 diaA DnaA initiator-associating protein DiaA Proteus mirabilis HI4320