Orthogroup:group_2046


Homologs in group_2046

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15340 FBDBKF_15340 Morganella morganii S1 epmA elongation factor P--(R)-beta-lysine ligase
EHELCC_10905 EHELCC_10905 Morganella morganii S2 epmA elongation factor P--(R)-beta-lysine ligase
NLDBIP_11250 NLDBIP_11250 Morganella morganii S4 epmA elongation factor P--(R)-beta-lysine ligase
LHKJJB_11110 LHKJJB_11110 Morganella morganii S3 epmA elongation factor P--(R)-beta-lysine ligase
HKOGLL_09720 HKOGLL_09720 Morganella morganii S5 epmA elongation factor P--(R)-beta-lysine ligase
F4V73_RS12115 F4V73_RS12115 Morganella psychrotolerans epmA elongation factor P--(R)-beta-lysine ligase
PMI_RS17855 PMI_RS17855 Proteus mirabilis HI4320 epmA elongation factor P--(R)-beta-lysine ligase

Distribution of group_2046 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2046 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2046

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2046.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 epmA 7

Product

# Product Occurence
1 elongation factor P--(R)-beta-lysine ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2269 7 J Translation, ribosomal structure and biogenesis (J) Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04568 7 elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00152 7 tRNA synthetases class II (D, K and N)

Annotations of the 519 SwissProt hits

Annotation Number of occurrences
Elongation factor P--(R)-beta-lysine ligase 86
Elongation factor P--(R)-beta-lysine ligase homolog 1
Lysine--tRNA ligase 404
Lysine--tRNA ligase 1 4
Lysine--tRNA ligase 2 3
Lysine--tRNA ligase, chloroplastic/mitochondrial 1
Lysine--tRNA ligase, cytoplasmic 2
Lysine--tRNA ligase, heat inducible 3
Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX 12
Probable lysine--tRNA ligase, cytoplasmic 3

Protein length

Unique protein length 325

Protein length distribution