Orthogroup:group_2030


Homologs in group_2030

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15215 FBDBKF_15215 Morganella morganii S1 aroL shikimate kinase AroL
EHELCC_11030 EHELCC_11030 Morganella morganii S2 aroL shikimate kinase AroL
NLDBIP_11375 NLDBIP_11375 Morganella morganii S4 aroL shikimate kinase AroL
LHKJJB_11235 LHKJJB_11235 Morganella morganii S3 aroL shikimate kinase AroL
HKOGLL_09845 HKOGLL_09845 Morganella morganii S5 aroL shikimate kinase AroL
F4V73_RS12230 F4V73_RS12230 Morganella psychrotolerans aroL shikimate kinase AroL
PMI_RS01775 PMI_RS01775 Proteus mirabilis HI4320 aroL shikimate kinase AroL

Distribution of group_2030 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2030 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2030

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2030.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 aroL 7

Product

# Product Occurence
1 shikimate kinase AroL 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0703 7 E Amino acid transport and metabolism (E) Shikimate kinase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01202 7 Shikimate kinase

Annotations of the 506 SwissProt hits

Annotation Number of occurrences
Bifunctional shikimate kinase/3-dehydroquinate synthase 2
Pentafunctional AROM polypeptide 56
Pentafunctional AROM polypeptide 1 2
Pentafunctional AROM polypeptide 2 2
Probable inactive shikimate kinase like 1, chloroplastic 1
Putative shikimate kinase 2
Shikimate kinase 320
Shikimate kinase (Fragment) 1
Shikimate kinase 1 48
Shikimate kinase 1, chloroplastic 2
Shikimate kinase 2 62
Shikimate kinase 2, chloroplastic 2
Shikimate kinase 3, chloroplastic 1
Shikimate kinase, chloroplastic 1
Threonine synthase-like 1 4

Protein length

Min length 170
Max length 177
Mean length (sd) 176.0 (2.6)
Median length 177.0

Protein length distribution