COG0220


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0220, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description tRNA G46 N7-methylase TrmB
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0220 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1992 FBDBKF_15000 12031 12750 1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Morganella morganii S1
1 group_1992 EHELCC_11245 72156 72875 -1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Morganella morganii S2
2 group_1992 NLDBIP_11590 72156 72875 -1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Morganella morganii S4
3 group_1992 LHKJJB_11450 72156 72875 -1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Morganella morganii S3
4 group_1992 HKOGLL_10060 72156 72875 -1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Morganella morganii S5
5 group_1992 F4V73_RS12450 72993 73712 -1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Morganella psychrotolerans
6 group_1992 PMI_RS01560 378939 379658 1 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB Proteus mirabilis HI4320