Orthogroup:group_2017



Homologs in group_2017

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15145 FBDBKF_15145 Morganella morganii S1 nqrD NADH:ubiquinone reductase (Na(+)-transporting) subunit D
EHELCC_11100 EHELCC_11100 Morganella morganii S2 nqrD NADH:ubiquinone reductase (Na(+)-transporting) subunit D
NLDBIP_11445 NLDBIP_11445 Morganella morganii S4 nqrD NADH:ubiquinone reductase (Na(+)-transporting) subunit D
LHKJJB_11305 LHKJJB_11305 Morganella morganii S3 nqrD NADH:ubiquinone reductase (Na(+)-transporting) subunit D
HKOGLL_09915 HKOGLL_09915 Morganella morganii S5 nqrD NADH:ubiquinone reductase (Na(+)-transporting) subunit D
F4V73_RS12300 F4V73_RS12300 Morganella psychrotolerans - NADH:ubiquinone reductase (Na(+)-transporting) subunit D
PMI_RS01700 PMI_RS01700 Proteus mirabilis HI4320 - NADH:ubiquinone reductase (Na(+)-transporting) subunit D

Distribution of group_2017 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2017 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2017

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2017.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nqrD 5
2 - 2

Product

# Product Occurence
1 NADH:ubiquinone reductase (Na(+)-transporting) subunit D 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1347 7 C Energy production and conversion (C) Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00349 7 Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02508 7 Rnf-Nqr subunit, membrane protein

Annotations of the 366 SwissProt hits

Annotation Number of occurrences
Ion-translocating oxidoreductase complex subunit A 129
Ion-translocating oxidoreductase complex subunit E 106
Na(+)-translocating NADH-quinone reductase subunit D 74
Na(+)-translocating NADH-quinone reductase subunit E 53
Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit A 1
Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit E 1
Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit A 1
Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit E 1

Protein length

Unique protein length 209

Protein length distribution