Homologs in group_2017

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14865 FBDBKF_14865 100.0 Morganella morganii S1 - Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein
EHELCC_15670 EHELCC_15670 100.0 Morganella morganii S2 - Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein
NLDBIP_16200 NLDBIP_16200 100.0 Morganella morganii S4 - Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein
HKOGLL_14760 HKOGLL_14760 100.0 Morganella morganii S5 - Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein
F4V73_RS07665 F4V73_RS07665 72.4 Morganella psychrotolerans - phosphatase PAP2 family protein
PMI_RS04085 PMI_RS04085 54.7 Proteus mirabilis HI4320 - phosphatase PAP2 family protein

Distribution of the homologs in the orthogroup group_2017

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2017

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76445 1.8e-72 223 47 1 218 1 lpxT Lipid A 1-diphosphate synthase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_15640
Feature type CDS
Gene -
Product Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein
Location 12186 - 12905 (strand: -1)
Length 720 (nucleotides) / 239 (amino acids)
In genomic island -

Contig

Accession ZDB_374
Length 116739 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2017
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01569 PAP2 superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0671 Lipid transport and metabolism (I) I Membrane-associated phospholipid phosphatase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19803 Kdo2-lipid A phosphotransferase [EC:2.7.4.29] Lipopolysaccharide biosynthesis -

Protein Sequence

MAVQRITLPLFISLAGIMLFLSWYLPVDHGWWALPDHAVFRFFNTPLAGNHSLAVFIAVINNRAFDLAALLLMGLIYYAAFRKQDSDGKRRLVMAGVVMVISAVLINQAGQAIPFNRLSPTLELDAVHRVSDITGIFTKDASKSSFPGDHGLMLIIFAAFVWRYAGFRYFAAAVLLTIIFSLPRIMAGAHWFSDIMAGSLSLALITVPWILLTPLSDQCVNFLVRHMPRLSDITKKISH

Flanking regions ( +/- flanking 50bp)

CTATCCGGAACTATTTCCGTAATAATATTTTATTATCATCAGGTTTTGTCATGGCAGTACAACGCATCACACTTCCGCTTTTTATCAGCCTCGCCGGTATCATGCTGTTTCTTTCCTGGTACCTGCCGGTTGATCACGGCTGGTGGGCGCTACCTGACCATGCTGTTTTCCGTTTTTTCAATACCCCGCTCGCCGGTAATCATTCACTGGCTGTATTTATTGCGGTTATTAACAACCGGGCATTTGATCTGGCAGCACTCCTGCTGATGGGACTTATCTATTATGCGGCTTTCCGCAAACAGGACAGCGACGGTAAACGCCGTCTGGTAATGGCAGGTGTGGTGATGGTAATAAGTGCGGTACTGATTAATCAGGCCGGACAGGCAATTCCTTTTAACCGCCTCAGCCCGACACTGGAACTGGACGCTGTTCACCGTGTCAGCGATATCACCGGGATCTTTACAAAAGATGCCTCAAAAAGCAGTTTTCCGGGCGACCACGGGCTGATGCTGATCATTTTTGCCGCCTTTGTCTGGCGTTATGCCGGATTCCGTTATTTTGCGGCAGCAGTTTTACTGACAATTATATTTTCTTTACCGCGGATAATGGCCGGTGCACACTGGTTCAGCGATATTATGGCCGGTTCGCTGTCACTGGCACTGATCACGGTTCCCTGGATTTTACTGACACCGCTGAGTGATCAGTGTGTAAATTTTCTGGTACGCCATATGCCCCGTTTATCCGATATTACAAAGAAAATTTCACATTAGTTAAACATATTTGACATCACATCCTGATTGTTTCGCTGACAAATTTAAGG