Orthogroup:group_2011



Homologs in group_2011

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15115 FBDBKF_15115 Morganella morganii S1 lpcA D-sedoheptulose 7-phosphate isomerase
EHELCC_11130 EHELCC_11130 Morganella morganii S2 lpcA D-sedoheptulose 7-phosphate isomerase
NLDBIP_11475 NLDBIP_11475 Morganella morganii S4 lpcA D-sedoheptulose 7-phosphate isomerase
LHKJJB_11335 LHKJJB_11335 Morganella morganii S3 lpcA D-sedoheptulose 7-phosphate isomerase
HKOGLL_09945 HKOGLL_09945 Morganella morganii S5 lpcA D-sedoheptulose 7-phosphate isomerase
F4V73_RS12335 F4V73_RS12335 Morganella psychrotolerans lpcA D-sedoheptulose 7-phosphate isomerase
PMI_RS01670 PMI_RS01670 Proteus mirabilis HI4320 lpcA D-sedoheptulose 7-phosphate isomerase

Distribution of group_2011 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2011 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2011

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2011.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lpcA 7

Product

# Product Occurence
1 D-sedoheptulose 7-phosphate isomerase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0279 7 G Carbohydrate transport and metabolism (G) Phosphoheptose isomerase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03271 7 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Lipopolysaccharide biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars
ADP-L-glycero-D-manno-heptose biosynthesis

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13580 7 SIS domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013171 1 phosphoheptose isomerase VF0044 Immune modulation
VFG013421 5 phosphoheptose isomerase VF0044 Immune modulation
VFG013422 1 phosphoheptose isomerase VF0044 Immune modulation

Annotations of the 277 SwissProt hits

Annotation Number of occurrences
DnaA initiator-associating protein DiaA 63
Lincomycin biosynthesis protein LmbN 1
N-acetylmuramic acid 6-phosphate etherase 1
Phosphoheptose isomerase 203
Phosphoheptose isomerase 1 1
Phosphoheptose isomerase 2 1
Probable arabinose 5-phosphate isomerase 1
Probable phosphoheptose isomerase 3
Uncharacterized HTH-type transcriptional regulator CPE0189 1
Uncharacterized HTH-type transcriptional regulator TTE0211 1
Uncharacterized protein HI_1657 1

Protein length

Unique protein length 192

Protein length distribution