Orthogroup:group_2003


Homologs in group_2003

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15060 FBDBKF_15060 Morganella morganii S1 gshB glutathione synthase
EHELCC_11185 EHELCC_11185 Morganella morganii S2 gshB glutathione synthase
NLDBIP_11530 NLDBIP_11530 Morganella morganii S4 gshB glutathione synthase
LHKJJB_11390 LHKJJB_11390 Morganella morganii S3 gshB glutathione synthase
HKOGLL_10000 HKOGLL_10000 Morganella morganii S5 gshB glutathione synthase
F4V73_RS12390 F4V73_RS12390 Morganella psychrotolerans gshB glutathione synthase
PMI_RS01625 PMI_RS01625 Proteus mirabilis HI4320 gshB glutathione synthase

Distribution of group_2003 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2003 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2003

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2003.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gshB 7

Product

# Product Occurence
1 glutathione synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0189 7 EHJQ Amino acid transport and metabolism (E)
Coenzyme transport and metabolism (H)
Translation, ribosomal structure and biogenesis (J)
Secondary metabolites biosynthesis, transport and catabolism (Q)		 Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02951 7 Prokaryotic glutathione synthetase, N-terminal domain
PF02955 7 Prokaryotic glutathione synthetase, ATP-grasp domain

Annotations of the 87 SwissProt hits

Annotation Number of occurrences
Glutamate--LysW ligase ArgX 1
Glutathione synthetase 53
Probable alpha-L-glutamate ligase 29
Probable alpha-L-glutamate ligase 1 1
Tetrahydromethanopterin:alpha-L-glutamate ligase 3

Protein length

Min length 316
Max length 318
Mean length (sd) 316.3 (0.8)
Median length 316.0

Protein length distribution