Orthogroup:group_1997



Homologs in group_1997

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15030 FBDBKF_15030 Morganella morganii S1 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
EHELCC_11215 EHELCC_11215 Morganella morganii S2 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
NLDBIP_11560 NLDBIP_11560 Morganella morganii S4 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
LHKJJB_11420 LHKJJB_11420 Morganella morganii S3 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
HKOGLL_10030 HKOGLL_10030 Morganella morganii S5 rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
F4V73_RS12420 F4V73_RS12420 Morganella psychrotolerans rdgB RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
PMI_RS01590 PMI_RS01590 Proteus mirabilis HI4320 - XTP/dITP diphosphatase

Distribution of group_1997 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1997 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1997

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1997.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rdgB 6
2 - 1

Product

# Product Occurence
1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 6
2 XTP/dITP diphosphatase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0127 7 F Nucleotide transport and metabolism (F) Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01519 7 XTP/dITP diphosphohydrolase [EC:3.6.1.66] Purine metabolism
Drug metabolism - other enzymes
Metabolic pathways
Nucleotide metabolism
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01725 7 Ham1 family

Annotations of the 316 SwissProt hits

Annotation Number of occurrences
Inosine triphosphate pyrophosphatase 57
Inosine triphosphate pyrophosphatase 1 1
Inosine triphosphate pyrophosphatase 2 1
Non-canonical purine NTP pyrophosphatase homolog 1
dITP/XTP pyrophosphatase 256

Protein length

Min length 197
Max length 198
Mean length (sd) 197.9 (0.4)
Median length 198.0

Protein length distribution