Orthogroup:group_1986


Homologs in group_1986

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14895 FBDBKF_14895 Morganella morganii S1 rplY 50S ribosomal protein L25
EHELCC_15700 EHELCC_15700 Morganella morganii S2 rplY 50S ribosomal protein L25
NLDBIP_16230 NLDBIP_16230 Morganella morganii S4 rplY 50S ribosomal protein L25
LHKJJB_15610 LHKJJB_15610 Morganella morganii S3 rplY 50S ribosomal protein L25
HKOGLL_14730 HKOGLL_14730 Morganella morganii S5 rplY 50S ribosomal protein L25
F4V73_RS07695 F4V73_RS07695 Morganella psychrotolerans rplY 50S ribosomal protein L25
PMI_RS04055 PMI_RS04055 Proteus mirabilis HI4320 rplY 50S ribosomal protein L25

Distribution of group_1986 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1986 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1986

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1986.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplY 7

Product

# Product Occurence
1 50S ribosomal protein L25 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1825 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L25 (general stress protein Ctc)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02897 7 large subunit ribosomal protein L25 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01386 7 Ribosomal L25p family

Annotations of the 471 SwissProt hits

Annotation Number of occurrences
General stress protein Ctc 1
Large ribosomal subunit protein bL25 468
Large ribosomal subunit protein bL25A 1
Large ribosomal subunit protein bL25B 1

Protein length

Min length 93
Max length 94
Mean length (sd) 93.1 (0.4)
Median length 93.0

Protein length distribution